Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., Dual-specificity RNA pseudouridine synthase RluA from Enterobacter sp. TBS_079

 Score =  169 bits (428), Expect = 1e-46
 Identities = 99/219 (45%), Positives = 135/219 (61%), Gaps = 14/219 (6%)

Query: 349 NPAQGQDITIVYQDDAIVVVNKPAEFLSVPG-VHVH-DSVLTRLKAQFTQAEGVFALHRL 406
           NP Q   + ++YQD+ I+VVNKP+  LSVPG +  H DSV+TR++  + QAE V   HRL
Sbjct: 7   NPPQDPWLVVLYQDEHIMVVNKPSGLLSVPGRLDEHKDSVMTRIQRDYPQAESV---HRL 63

Query: 407 DMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRP 466
           DM+TSG++V AL + A ++L++QF  R  +K+YVA + G     +G + LPL  D  +RP
Sbjct: 64  DMATSGVIVVALNKAAERELKRQFRDREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRP 123

Query: 467 RQKVCWQQGKPALTHWETVQ-VEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDL 525
           +QKVC++ GK A T +E ++    N  RV L P TGR+HQLRVH    L L  PI+GD  
Sbjct: 124 KQKVCYETGKAAQTEYEVLEYAPDNTARVLLKPITGRSHQLRVHM---LALGHPILGDRF 180

Query: 526 YGLQD-----KRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
           Y   D      RL LHA+ L+  HP     MTF+   DF
Sbjct: 181 YAPPDALALAPRLQLHAQTLTITHPVFGNAMTFKAPVDF 219