Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  129 bits (323), Expect = 4e-34
 Identities = 80/241 (33%), Positives = 137/241 (56%), Gaps = 10/241 (4%)

Query: 262 RNSIEGLIEKGIRDEEFIPYYQPIVDSRTQEVVGYEVLLRWQK-GHQLVPPSLFISAAED 320
           + +IE  +  G++ +EF+ +YQP +D ++ +VVG E L+RW +  H LV PS FI  AED
Sbjct: 363 QQTIESGLRLGLQRKEFVLHYQPKLDLKSGKVVGVEALVRWNRPDHGLVYPSDFIPVAED 422

Query: 321 SGLVVKITNQLIQ----QVHRDLAQIPAPRWVSINVVADHLEQHH----LTHLLEELHWP 372
           SGL+V ++  ++Q    Q  R  AQ   P ++S+NV A    Q      +   L+E    
Sbjct: 423 SGLIVPLSQWVLQEACQQACRWQAQGMRPLYLSVNVSAIDFRQRGFVEGIARTLKETGLA 482

Query: 373 YSERLKFELTERVPIKAMTQAQEEVFYLLKKGYQFKIDDFGTGYGGFAYLQNLQISSIKI 432
            ++ L+ E+TE V ++ +      +  + + G +  IDDFGTGY   +YLQ   +  +KI
Sbjct: 483 PTQ-LELEITESVLMQNVDTTVAILKAIKQLGIRLAIDDFGTGYSSLSYLQKFPVDVLKI 541

Query: 433 DKMFVDTINTHDVKISVLDSIIASAQGGNIEVIAEGVEHQYQVDYLAERNVFWIQGYFYA 492
           D+ FV  ++       ++ +II+  +  N+ +IAEGVE   Q+++L + +   +QGY+++
Sbjct: 542 DQSFVGDLSIDSNDAKLVSTIISLGKSLNLHIIAEGVETLEQLEFLKKHHCEEVQGYYFS 601

Query: 493 K 493
           K
Sbjct: 602 K 602