Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  144 bits (363), Expect = 7e-39
 Identities = 87/270 (32%), Positives = 145/270 (53%), Gaps = 8/270 (2%)

Query: 239 WGIPLAVLLGVFLSASYLILRNYRNSIEGLIEKGIRDEEFIPYYQPIVDSRTQEVVGYEV 298
           W +P++++LG+ +     +L   R S++  +   IR  E    YQPI D  ++  VG E 
Sbjct: 215 WMLPISLMLGLGIGFQVFLLARQRQSMDAELHGAIRRGELQVLYQPIFDLSSRNCVGAEA 274

Query: 299 LLRWQKGH-QLVPPSLFISAAEDSGLVVKITNQLIQQVHRDLAQIPAPR---WVSINVVA 354
           LLRW++    L  P LFI  AE++G + +IT+ ++Q++   L Q+       ++S+N+ A
Sbjct: 275 LLRWRRPDGTLTSPDLFIPMAENTGQIRQITDFVLQRLFDQLGQLLRANPQLYISVNLAA 334

Query: 355 DHLEQHHLTHLLEEL---HWPYSERLKFELTERVPIKAMTQAQEEVFYLLKKGYQFKIDD 411
             +    +  ++  L   H   + ++ FE+TER  +  +  A++ +  L   G+Q  IDD
Sbjct: 335 CDVMVPRIGEVIARLLALHRVSAHQIAFEVTERGLVDVLV-ARDNLQSLRDVGHQVLIDD 393

Query: 412 FGTGYGGFAYLQNLQISSIKIDKMFVDTINTHDVKISVLDSIIASAQGGNIEVIAEGVEH 471
           FGTGY   AYLQ L +  +KIDK F+D +        V   II  A    ++VIAEG+EH
Sbjct: 394 FGTGYCSLAYLQTLPVDCLKIDKAFIDALGHDAASSGVAPHIIRMAHALQLKVIAEGIEH 453

Query: 472 QYQVDYLAERNVFWIQGYFYAKPMPLEQVL 501
           + Q  YL+   V + QG+ +A  +   Q++
Sbjct: 454 EAQASYLSSEGVRFGQGWLFAHALSAVQLI 483