Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1484 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  139 bits (351), Expect = 6e-37
 Identities = 89/260 (34%), Positives = 145/260 (55%), Gaps = 24/260 (9%)

Query: 261  YRNSIEGLIEKGIRDEEFIPYYQPIVDS-RTQEVVGYEVLLRWQKGHQ-LVPPSLFISAA 318
            Y   +E  + K +  +EF  Y+QP +D  +  +VVG E LLRW    +  + P +FI  A
Sbjct: 1227 YHLKLEAELRKAMDRQEFELYFQPQIDILKDDKVVGMEALLRWHHPKEGYIRPDIFIRVA 1286

Query: 319  EDSGLVVKITNQLIQQVHRDLAQIPAPRW---------VSINVVADHLEQ----HHLTHL 365
            E  GL+++I   +I+Q     A +   +W         +S+NV A H  Q      +   
Sbjct: 1287 ESCGLIIEIDRWVIKQ-----ACLQGAKWAEHFGDELKLSVNVSAVHFRQPDFIQDVQQA 1341

Query: 366  LEELHWPYSERLKFELTERVPIKAMTQAQEEVFYLLKKGYQFKIDDFGTGYGGFAYLQNL 425
            L+E   P ++ L  E+TE V +K +  A++ +  L + G +  IDDFGTGY   AYL++ 
Sbjct: 1342 LKESGMP-AKMLGLEITEGVLMKELHVAKDHLKALREIGIEVAIDDFGTGYSSLAYLRSF 1400

Query: 426  QISSIKIDKMFVDTINTHDVKISVLDSIIASAQGGNIEVIAEGVEHQYQVDYLAERNVFW 485
             +S++KID+ F+  I T++   ++  SII  A+   ++V+AEGVE Q Q++ +  R  + 
Sbjct: 1401 DVSTLKIDRSFLIDIATNEADQAIASSIIELARNLKLKVVAEGVETQEQLEQVFSRGCYI 1460

Query: 486  IQGYFYAKPMPLEQVLAFEK 505
            IQGY++AKPM +++   FEK
Sbjct: 1461 IQGYYFAKPMTIDE---FEK 1477