Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1437 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  134 bits (336), Expect = 3e-35
 Identities = 87/258 (33%), Positives = 131/258 (50%), Gaps = 20/258 (7%)

Query: 265  IEGLIEKGIRDEEFIPYYQPIVDSRTQEVVGYEVLLRWQKG-HQLVPPSLFISAAEDSGL 323
            +E LI +G+RD+ F  YYQP +D RT ++ G E L+R     H L+PP  FI  AE++GL
Sbjct: 1174 VENLIREGLRDDLFEVYYQPKIDLRTSKMAGMEALVRLNHPEHGLIPPGDFIPLAEENGL 1233

Query: 324  VVKITNQLIQQVHRDLAQIPAPRW---------VSINVVADHLE----QHHLTHLLEELH 370
            +V+I   ++++     A   A  W         V++N+ +        Q  +  +L    
Sbjct: 1234 IVEIGEVVLRK-----ACFAAQNWRRQNLFNGRVAVNLSSQQFALPDLQQRIESILRLTQ 1288

Query: 371  WPYSERLKFELTERVPIKAMTQAQEEVFYLLKKGYQFKIDDFGTGYGGFAYLQNLQISSI 430
             P +  L+ E+TE   IK   +A + +  L K G    +DDFGTGY   +YL+   I ++
Sbjct: 1289 LP-AANLELEITEGTVIKQPEKAIKVMMQLSKMGVSLALDDFGTGYSSLSYLKRFPIDTL 1347

Query: 431  KIDKMFVDTINTHDVKISVLDSIIASAQGGNIEVIAEGVEHQYQVDYLAERNVFWIQGYF 490
            KIDK FVD I+  D  + ++DSII  A    + V+ EGVE   Q+  L       IQG+ 
Sbjct: 1348 KIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEEASQLSILKALKCEEIQGFI 1407

Query: 491  YAKPMPLEQVLAFEKQPS 508
            Y+K +         KQ S
Sbjct: 1408 YSKAVNETSFTELLKQES 1425