Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1094 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  132 bits (333), Expect = 5e-35
 Identities = 84/250 (33%), Positives = 133/250 (53%), Gaps = 12/250 (4%)

Query: 262  RNSIEGLIEKGIRDEEFIPYYQPIVDSRTQEVVGYEVLLRWQKGHQ-LVPPSLFISAAED 320
            R ++E  +   +   EF  +YQPIVD+ + E V  E LLRW+   + LVPP  FI  AE+
Sbjct: 830  RITLEQSLRSAVLQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEE 889

Query: 321  SGLVVKITNQLIQQVHRDLAQIPAPRWVSINVVAD-------HLEQHHLTHLLEELHWPY 373
            +GL+  I   +IQQ  RDL Q  + + + IN+  +       H +  H   +L  L   Y
Sbjct: 890  TGLIEPIGEWVIQQALRDLRQCHS-QGIMINMAINVSGRQLAHGDPSHFACMLNGLLQKY 948

Query: 374  S---ERLKFELTERVPIKAMTQAQEEVFYLLKKGYQFKIDDFGTGYGGFAYLQNLQISSI 430
                + +  E+TE + +     + + +  +   G +  +DDFGTGY   +YL+   IS I
Sbjct: 949  DVAPQYVHIEITESILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPISVI 1008

Query: 431  KIDKMFVDTINTHDVKISVLDSIIASAQGGNIEVIAEGVEHQYQVDYLAERNVFWIQGYF 490
            KIDK FVD +       +++ +II   Q  ++ ++AEGVE + Q  +L      ++QGY 
Sbjct: 1009 KIDKSFVDNMLEDRADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDFVQGYL 1068

Query: 491  YAKPMPLEQV 500
             AKPMPL+++
Sbjct: 1069 VAKPMPLKEL 1078