Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., rtn protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  158 bits (399), Expect = 5e-43
 Identities = 140/507 (27%), Positives = 231/507 (45%), Gaps = 50/507 (9%)

Query: 17  FAILLSPLIIFLLAQPLWAPLVAQHLLNQKFAEINQYLEQRNLALDSMITHQ--VQSLTF 74
           F +L  P ++ + +    + ++  +L+++K  E+ ++  +R   L+ +++    +     
Sbjct: 27  FIMLFMPTVLAMAS----SYVITNYLVDKKAQEVGEFNLKR---LEHLLSESETIGEYAT 79

Query: 75  TCNNHDLQLIRDPQFYNRFVRLIGIENAQGDGCST----IGYPI-ALAEDSSAAEPTGFT 129
           T +  D   + +   +  + R + + NA G  CS+    I YP+ +L  + +  +P  F 
Sbjct: 80  TLSEGDCGALNEYMQFKPYYRGVLLFNAHGFHCSSTMGVIDYPLNSLLPEDTLKKPAYFI 139

Query: 130 LSATPKTQTASRELLI--QYSEPRGRVFWVVDGSWAQDLLREPCGDCFYLHFKFLDPMLN 187
           +  TP        L+I  Q +  RG V  +++G               YL   F+ P + 
Sbjct: 140 VPETPARSGVPAILVISTQANLTRGAVV-IIEGQ--------------YLIDSFIQPEVF 184

Query: 188 ELAIQRGNIAILGESNPLSIRQHSGNAPFHSEQTLLAGETLLTLARQQVFTW-------G 240
              +    + + G + P   +   G       +     E ++ L   Q F W       G
Sbjct: 185 PRPVSHVVLGLKGATLPTVPQFGDGKVVAVKAEH---SEVVILLEVSQAFFWHFFWICFG 241

Query: 241 IPLAVLLG-VFLSASYLILRNYRNSIEGLIEKGIRDEEFIPYYQPIVDSRTQEVVGYEVL 299
           I L  LL  V+L   +L  +  R+S+   I+ GI ++EF   YQPIV S   +  G E L
Sbjct: 242 ILLPFLLAFVWLVGLHLWRKKSRSSLADDIKSGIENQEFFLVYQPIVSSDDGKAKGVEAL 301

Query: 300 LRWQKGHQ-LVPPSLFISAAEDSGLVVKITNQLIQQVHRDLAQIPAPRW--VSINVVADH 356
           +RWQ     LV P LFI  AE S L+V +TN + ++   D +++       +  NV  +H
Sbjct: 302 VRWQHPQMGLVRPDLFIPIAEQSQLIVPLTNYIFERALADFSKLSVDSGFRIGFNVAPEH 361

Query: 357 LEQHHLTHLLEELHWPYSE---RLKFELTERVPIKAMTQAQEEVFYLLKKGYQFKIDDFG 413
             Q  +      L   ++    +   E+TER  + A     E +  L +      IDDFG
Sbjct: 362 FIQSDIEAKFRYLKDAFARIGVQPLIEITERQLLTA--DMCERITALRELDILVAIDDFG 419

Query: 414 TGYGGFAYLQNLQISSIKIDKMFVDTINTHDVKISVLDSIIASAQGGNIEVIAEGVEHQY 473
           TG    + LQ   +  +KIDK F+DTI    V   VLD+II      N   +AEGVE Q 
Sbjct: 420 TGQTTLSLLQTFTLDYLKIDKCFIDTIGQDSVTSHVLDTIIELCHKMNYVAVAEGVETQQ 479

Query: 474 QVDYLAERNVFWIQGYFYAKPMPLEQV 500
           Q DYL  R+V ++QGY +AKPM L+++
Sbjct: 480 QADYLISRDVHFLQGYLFAKPMKLDEL 506