Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1491 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  136 bits (343), Expect = 5e-36
 Identities = 96/264 (36%), Positives = 140/264 (53%), Gaps = 16/264 (6%)

Query: 261  YRNSIEGLIEKGIRDEEFIPYYQPIVDS-RTQEVVGYEVLLRWQKGHQ-LVPPSLFISAA 318
            Y   +E  + K I  +EF  YYQP +D  R  + +G E L+RWQ      V P +FI  A
Sbjct: 1228 YHLRLEADLRKAIERQEFELYYQPQIDILRGDKFIGMEALIRWQHPVDGFVRPDIFIKVA 1287

Query: 319  EDSGLVVKITNQLIQQVHRDLA----QIPAPRWVSINVVADHLEQHH----LTHLLEELH 370
            E  GLVV I   +++    D A    Q   P  +S+N+ A H  Q      +  +L+  H
Sbjct: 1288 EACGLVVDIDRWVLRCACLDGARWAKQTIEPFKMSVNISAVHFRQPDFIDGVKKILDATH 1347

Query: 371  WPYSERLKFELTERVPIKAMTQAQEEVFYLLKKGYQFKIDDFGTGYGGFAYLQNLQISSI 430
             P S  L  E+TE V +K +  A+  +  L   G +  IDDFGTGY   AYL+N ++ ++
Sbjct: 1348 MPASS-LCLEITEGVLMKELQVAKTHLKQLDDLGIEVAIDDFGTGYSSLAYLRNFEVDTL 1406

Query: 431  KIDKMFVDTINTHDVKISVLDSIIASAQGGNIEVIAEGVEHQYQVDYLAERNVFWIQGYF 490
            KID+ F+  I ++    +++ SII  A+   + VIAEGVE   Q++ L  R  + +QGY+
Sbjct: 1407 KIDRSFLIDIASNGADQAIVSSIIELARNLKLTVIAEGVETVEQLEQLFSRGCYIVQGYY 1466

Query: 491  YAKPMPLEQVLAFEK--QPSIPLN 512
            +AKPM    V  FEK  Q   PL+
Sbjct: 1467 FAKPM---SVSDFEKYLQSQYPLD 1487