Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1487 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  137 bits (346), Expect = 2e-36
 Identities = 86/249 (34%), Positives = 137/249 (55%), Gaps = 11/249 (4%)

Query: 261  YRNSIEGLIEKGIRDEEFIPYYQPIVDS-RTQEVVGYEVLLRWQKGHQ-LVPPSLFISAA 318
            Y   +E  + K I  EEF  YYQP +D  R  + +G E L+RW+   +  + P +FI  A
Sbjct: 1227 YHLRLEADLRKAIEREEFELYYQPQIDILRGDKFIGMEALIRWRHPKEGYIRPDIFIKVA 1286

Query: 319  EDSGLVVKITNQLIQQVHRDLAQ----IPAPRWVSINVVADHLEQ----HHLTHLLEELH 370
            E  GLVV+I   + ++   D A+      AP  +S+N+ A H  Q      L  +L +  
Sbjct: 1287 EACGLVVEIDRWVFRRACLDGAKWVKRCAAPFKLSVNISAVHFRQPDFIEGLKKILADTQ 1346

Query: 371  WPYSERLKFELTERVPIKAMTQAQEEVFYLLKKGYQFKIDDFGTGYGGFAYLQNLQISSI 430
             P S  L  E+TE V +K +  A+  +  L + G +  IDDFGTGY   AYL++  ++++
Sbjct: 1347 MPTSS-LGLEITEGVLMKEVQAAKSHLTQLKELGIEVAIDDFGTGYSSLAYLRHFDVNTL 1405

Query: 431  KIDKMFVDTINTHDVKISVLDSIIASAQGGNIEVIAEGVEHQYQVDYLAERNVFWIQGYF 490
            KID+ F+  I T+    +++ SII  A+   + V+AEGVE   Q++ +  R  + +QGY+
Sbjct: 1406 KIDRSFLIDIATNSADQAIVSSIIELARNLKLTVVAEGVETVEQLEQVFSRGCYIVQGYY 1465

Query: 491  YAKPMPLEQ 499
            +AKPM + +
Sbjct: 1466 FAKPMSVTE 1474