Pairwise Alignments

Query, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N2E2

 Score =  179 bits (454), Expect = 7e-50
 Identities = 106/288 (36%), Positives = 163/288 (56%), Gaps = 8/288 (2%)

Query: 1   MSLVNLLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPI 60
           ++LV++L+LL LAAIWG SFLFMRI A   G       RV  A + L ++  L+R     
Sbjct: 1   VNLVDILRLLSLAAIWGASFLFMRIIAPVIGTIPTAFFRVSIAFVGLLVILALMRIDWNF 60

Query: 61  RQHWPHFLILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRK 120
           R      + LGLIN+ +P   ++ AA  L     +I N+T P+ G +IG L+    L+  
Sbjct: 61  RGKLKVVMGLGLINSGIPATFYSLAAQVLPAGYSAIFNATTPLMGVLIGGLFFSEKLTPA 120

Query: 121 AVAGLLLGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTK----QAPQLSA 176
            V+G+ LG+ GV ++     VA      +  +   LA   YG A   T+    Q   L +
Sbjct: 121 KVSGVCLGLFGVGILTRAGPVAFDLQLLMGALACLLATTCYGFAGFLTRRWLDQQGGLDS 180

Query: 177 FENAHGSMWAACLWVAPLMWFVPLRETPSS----LEWGAVILLGVICTGLAYLIYFRLVK 232
             +A GSM+ A +++ PL  +  + + P+S      W +++ LG++CT LAY++YFRL+ 
Sbjct: 181 RLSALGSMFGATVFLLPLFGYSVISQPPASWGGWSVWMSLLGLGLVCTALAYILYFRLLS 240

Query: 233 AIGAASTLSVTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAGTMLV 280
           +IG   +++VTFLIP FG+LWG  +LDEP+G+  L+G +L+ A   LV
Sbjct: 241 SIGPVKSMTVTFLIPPFGVLWGALLLDEPLGMAHLYGGVLIAAALWLV 288



 Score = 24.3 bits (51), Expect = 0.004
 Identities = 17/70 (24%), Positives = 30/70 (42%)

Query: 212 VILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGILWGYWILDEPIGLNTLFGTL 271
           V+ LG+I +G+    Y    + + A  +       P+ G+L G     E +    + G  
Sbjct: 67  VMGLGLINSGIPATFYSLAAQVLPAGYSAIFNATTPLMGVLIGGLFFSEKLTPAKVSGVC 126

Query: 272 LVLAGTMLVT 281
           L L G  ++T
Sbjct: 127 LGLFGVGILT 136