Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  135 bits (341), Expect = 2e-36
 Identities = 101/391 (25%), Positives = 177/391 (45%), Gaps = 5/391 (1%)

Query: 14  MLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDA 73
           +L+   + A G + +  YLP+ P ++     D+   Q+ +  + LG    QL YG ++D 
Sbjct: 6   ILILGALSAFGPLAIDFYLPAFPAMATAFGTDEKHIQLTLAAYFLGLSIGQLAYGPVADR 65

Query: 74  VGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGF 133
            GRR   L G G++ L ++ C   +   + L   R +Q LG  +  V+ R+V+ D  D  
Sbjct: 66  FGRRIPLLTGVGLFTLASLACAY-APSLEWLIGARFVQALGGCAGMVISRAVVSDKCDAV 124

Query: 134 HLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETLP 193
              K  S L +   + PI+AP+LGG L     WQS+FI + L+     T   + LPE+LP
Sbjct: 125 GSAKVFSQLMLVMGLAPILAPMLGGLLVNLHGWQSIFIALTLFSALASTAVALWLPESLP 184

Query: 194 YPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAADY 253
               R    G +  Y +LLT+      A    ++       ++  PF+  K  G+ A  +
Sbjct: 185 DYVPRQPLSGALRQYGRLLTDAVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEHF 244

Query: 254 GSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEFSVFNLIWAF- 312
           G      ++G +L + +   L S+     LL  A+ + + AGL LL         +W   
Sbjct: 245 GWLFGTNAAGFILVAQVNARLLSKRGPAFLLSRAVWVYLGAGLSLLAVSSLQPAQLWPLL 304

Query: 313 --TWLSIAQ-GISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYLVEHWVTSQN 369
              ++ IA  G   P A+   ++   ++AG+ SA+ G +Q  +A      +      +  
Sbjct: 305 VPLFICIASLGCILPNASACAMNGQGARAGSASAMLGCLQFSVAAGAASLVAALHDGTAV 364

Query: 370 AMGVFYILVGITMLSVLIATKKAHSQPSAAQ 400
            M +   L G+ ++   + T++  +  + AQ
Sbjct: 365 PMALVISLCGLLVVGAAMLTRRLQNARALAQ 395