Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., multidrug transporter CflA from Pseudomonas fluorescens FW300-N2C3

 Score =  127 bits (318), Expect = 8e-34
 Identities = 108/380 (28%), Positives = 176/380 (46%), Gaps = 26/380 (6%)

Query: 20  IIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDAVGRRPT 79
           + A   +  +I LP+   I  DL V      + ++ F + F   QL  G L+D  GR+  
Sbjct: 32  LAAISMLSTNIILPAFAAIGEDLGVTARELGLTLSSFFITFALGQLVVGPLADRYGRQKL 91

Query: 80  FLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGFHLTKAL 139
            L G  ++++GTV+  + S     L  GR++Q LG  +ASVL R++ RD ++G  L +AL
Sbjct: 92  VLGGLSVFVVGTVIAGLAST-LDVLIAGRVVQALGVCAASVLSRAIARDLFEGETLARAL 150

Query: 140 SYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETLPYPKRRV 199
           S   I  +  P  +P+ G  LA  L W+++FI V L    +    +  L ET P  +R  
Sbjct: 151 SLTMIATAAAPGFSPLAGSVLAVTLGWRAIFILVGLAAVVLAFFYVRDLGETHPADRRAP 210

Query: 200 -QWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAADYG---- 254
              + +V+ Y +L+ +++    A    L       + +  P +L + +G+T+   G    
Sbjct: 211 HSAKSVVLAYRRLVLDKRFILPALSMSLLMSGLFASFAAAPAILMQGIGLTSVQTGLYFA 270

Query: 255 STLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEFSVFNLIW---- 310
           ST+ +  +  +    L +   +R  V  LLG A +++   G  LLL   +V  L W    
Sbjct: 271 STVFVVFAAGMAAPRLAHRHGTR--VITLLGIACAMI---GGGLLLVGPAVPGLWWYALS 325

Query: 311 --AFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYLVEHWVTSQ 368
              F W     G++ PL T + + P   +AG  SAL G + MG A L        W+ S 
Sbjct: 326 MVTFLW---GMGLANPLGTAITMGPFGKEAGMASALLGFLSMGTAAL------TTWLASV 376

Query: 369 NAMGVFYILVGITMLSVLIA 388
            +      L GI   + L+A
Sbjct: 377 LSFAPVTTLGGIQATACLLA 396