Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., Bicyclomycin resistance protein from Pseudomonas fluorescens FW300-N1B4

 Score =  139 bits (351), Expect = 1e-37
 Identities = 102/363 (28%), Positives = 169/363 (46%), Gaps = 10/363 (2%)

Query: 12  TPMLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALS 71
           T +L+    +   Q+G+SIYL +LP I+RDL  D +     + ++L+G     LF+G+L 
Sbjct: 5   TTLLITCCTVFLAQLGMSIYLSALPEIARDLSADASQVSWGLAVYLIGMALPMLFWGSLG 64

Query: 72  DAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYD 131
             +GR+P  L   GIY +G  L + +    ++  F RL+QG+GA   SV+ R ++RDS+ 
Sbjct: 65  QRIGRKPVLLAALGIYGVGN-LALPLGQTLESFLFFRLIQGVGASGISVMARVLIRDSFR 123

Query: 132 GFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPET 191
           G  L KALS++SI+  +   I   LG  +   L W  +F    L  G    + +++   T
Sbjct: 124 GDLLAKALSWISISFVVALGIGQYLGSIIQVALGWPMIF---YLLGGVSLLMAVVVARLT 180

Query: 192 LPYPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAA 251
            P             +Y  +L ++     A    L Y   +   +  P +LQ     +A 
Sbjct: 181 FPVLAAENTLSSAWTSYWHILGHRAFLLPALVGGLGYGVIVAFNTAAPLILQGPFNWSAV 240

Query: 252 DYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEF---SVFNL 308
           +YG      S+   LG+V VN    R   RQL+   + L++     +LL      S+  L
Sbjct: 241 EYGLLGWPISAAYFLGAVAVNRFVLRTGQRQLMTAGVGLVLAGSAVMLLGSIAGTSIELL 300

Query: 309 IW-AFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYLVEHWVTS 367
            W  + +    Q +++P++ +L             ALSG I   +A ++GG  +   + S
Sbjct: 301 FWLPYCFAVFGQSLNYPISLSLANEGSPVGGAYAMALSGFIHQLMAAVIGG--IASLIAS 358

Query: 368 QNA 370
           Q A
Sbjct: 359 QQA 361