Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., drug resistance transporter, Bcr/CflA subfamily from Pseudomonas stutzeri RCH2

 Score =  119 bits (298), Expect = 2e-31
 Identities = 98/355 (27%), Positives = 158/355 (44%), Gaps = 23/355 (6%)

Query: 14  MLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDA 73
           +L+   + A G + + +YLP+ PL+++         Q+ +  + +G    QL YG L+D 
Sbjct: 6   LLILGALSAFGPLAIDMYLPAFPLLAQSFGTSVDHVQLSLAAYFIGLAIGQLVYGPLADR 65

Query: 74  VGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGF 133
            GRR   L+G  ++ L + L    +     L   R +Q LG  +  V+ R+V+RD  D  
Sbjct: 66  YGRRGPLLIGVTLFTLAS-LASAFAPSMDWLIGVRFVQALGGCAGMVVARAVVRDLCDPM 124

Query: 134 HLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETLP 193
              K  S L +   + PI+APV GG L     W S+FI + L+         + LPET P
Sbjct: 125 TSAKVFSQLMLVMGLAPILAPVAGGALLASFGWPSIFILLTLFSAMCLVAVTLWLPETYP 184

Query: 194 YPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAADY 253
               R    G +  Y +L  ++          L        ++  PF+  +  G+    +
Sbjct: 185 AGLPRQPMSGALGQYLRLFRDRFFIGHVLTGALCMAGMFAYITGSPFVFIELYGVKPEHF 244

Query: 254 GSTLIIPSSG-LLLGSVLVNMLTSR---FSVRQ----LLGCAISLMVFA-----GLWLLL 300
           G    I ++G +L+  V V ++  R   F VR+      G A++L+  A      LW L 
Sbjct: 245 GWLFGINAAGFILMAQVNVRLVRWRGPEFWVRRWVWFFFGSALALLAVAAAQPESLWPL- 303

Query: 301 TEFSVFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGL 355
                  LI  F  +S   G   P AT   ++  ++ AG+ SAL GS+Q  IA +
Sbjct: 304 -------LIPLFCCVS-CLGCLLPNATACAMADQRANAGSASALLGSMQFTIAAI 350