Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., drug resistance transporter, Bcr/CflA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  145 bits (365), Expect = 3e-39
 Identities = 110/397 (27%), Positives = 191/397 (48%), Gaps = 27/397 (6%)

Query: 13  PMLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSD 72
           P+L+++++++   + + IYLPS+P ++ D  VD+   Q  + LFL   G  Q+  G L+D
Sbjct: 7   PILMSLVLLSP--LAIDIYLPSMPAMALDFSVDERQVQSTLVLFLFAMGVGQVLIGPLAD 64

Query: 73  AVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDG 132
             GRRP  L G  +Y++ ++L  M +  F+ L+  RLLQGL A S S++  S +RDSY  
Sbjct: 65  RYGRRPVALFGTVLYVISSLLA-MAALEFELLQLARLLQGLAACSTSIVAFSAVRDSYSS 123

Query: 133 FHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETL 192
               +  SYL+    ++P +AP LGG LA    W+S F F+  Y   +  +    LPET 
Sbjct: 124 ADSARIYSYLNGAICVIPALAPTLGGLLAIQFGWRSTFAFMAFYGLVMLLVVGYRLPETR 183

Query: 193 PYPKRRV----QWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGM 248
           P          +W      YA +L N      A     +  A L  +S     L  +LG+
Sbjct: 184 PAHTESAGPLYRWG----RYAPVLKNSHFMFYAVTCMAAMAAILCYVSYSSIWLIGKLGV 239

Query: 249 T----AADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEFS 304
           +    +  +G   ++         V++  L +R +V   LG    LM+ A +  L+ +  
Sbjct: 240 SELAFSGLFGLNAVVNVVACFAAPVVIRKLGNRPTVLVALG----LMILASVLELVLQLP 295

Query: 305 VF------NLIWAFTWLSIAQGISFPL--ATTLLLSPHKSQAGAVSALSGSIQMGIAGLL 356
            +      +  +    + +  G +F L  AT++ L+P   +AG  +AL G IQM  A ++
Sbjct: 296 AWASPMAASFAFMLPMMLLCVGFAFLLGPATSMALAPFGERAGTATALLGFIQMSGASVI 355

Query: 357 GGYLVEHWVTSQNAMGVFYILVGITMLSVLIATKKAH 393
              +    +T+  A+G     + + +L++++  +  H
Sbjct: 356 TALVQLTPMTAPYAIGYTMGGLALVLLAIMLMPRFGH 392