Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella loihica PV-4

 Score =  132 bits (331), Expect = 2e-35
 Identities = 106/392 (27%), Positives = 173/392 (44%), Gaps = 49/392 (12%)

Query: 10  RRTPMLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGA 69
           RR  + + M+++    + + IYLPS+P+++ +  V  +  Q  + LFL   G  Q+  G 
Sbjct: 2   RRNLLPILMLMVVLSPLAIDIYLPSMPVMAAEFAVSASQVQSTLVLFLFAMGVGQVLIGP 61

Query: 70  LSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDS 129
           L+D  GRRP  L G  +Y+  ++L  +  + FQ L+  R+LQGL A S S++  S +RD 
Sbjct: 62  LADRYGRRPIALGGLLLYIASSLLAAVAME-FQWLQLARVLQGLAACSTSIVVFSAVRDC 120

Query: 130 YDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILP 189
           +      +  SYL+    ++P +AP LGG LA    W+S F+F+ LY   I  +    LP
Sbjct: 121 FTPKEGARYYSYLNGVICVIPALAPTLGGLLALQFGWRSTFVFMTLYAIIIMIIVGYRLP 180

Query: 190 ETLPYPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMT 249
           ET P                       VT    Y W  Y   L+    + +      GM 
Sbjct: 181 ETRP--------------------ANTVTEGPLYRWSRYKPVLMDPHFMFYAFACMAGMA 220

Query: 250 A----ADYGSTLIIPS--------SGLLLGSVLVN--------MLTSRFSVRQLLGCAIS 289
           A      Y    +I +        SGL   + LVN        ++  +   R  +  A+S
Sbjct: 221 AILAYVSYSPVWLIETIGVSELTFSGLFGLNALVNIGACFAAPVVIQKLGNRPTVIVALS 280

Query: 290 LMVFAGLWLLLTEF--------SVFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAV 341
            M+ + L  L  ++        + F  +     L I   +    AT++ L+    +AG  
Sbjct: 281 AMLVSALLQLAVQWAGPQTGLAAAFGFMLPMMLLCIGFALLLGPATSMALAGFGERAGTA 340

Query: 342 SALSGSIQMGIAGLLGGYLVEHWVTSQNAMGV 373
           +A+ G IQM  A +L G + +  +T+  A+ V
Sbjct: 341 TAMLGFIQMSGASILAGLVQQTSLTAPYAVVV 372