Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (323), Expect = 2e-34
 Identities = 105/405 (25%), Positives = 185/405 (45%), Gaps = 32/405 (7%)

Query: 14  MLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDA 73
           +L +  ++     G+ +YL  LP I+  L   +A   +  +++L G   + LF G+L+D 
Sbjct: 5   LLCSFGLVLMYPTGIDMYLVGLPQIASQLGASEAQLHIAFSVYLAGMATTMLFAGSLADR 64

Query: 74  VGRRPTFLLGQGIYLLGTVLCV--MMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYD 131
           +GR+P  L G  ++ L +        SD F    F    QG+GAG   V+  ++LRD  D
Sbjct: 65  IGRKPITLFGALLFALASYFAAGSQTSDLFLIARFA---QGIGAGCCYVVAFAILRDVLD 121

Query: 132 GFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPET 191
                K LS ++    I+P+IAPV+G  +     W S+F  +      +F L L++L ET
Sbjct: 122 DKRRAKVLSMVNGVTCIIPVIAPVIGHLIMLKFPWPSLFYTMAAMGLLVFALCLLVLRET 181

Query: 192 ----------LPYPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFL 241
                     LP  +R    +G  I+   ++T   VT+  SY           +++ P L
Sbjct: 182 HSKAAFHTQALPGVQRESFKQGFFIS-RLVITTLGVTTILSY-----------VNVSPML 229

Query: 242 LQKQLGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLT 301
           +  Q+G     Y +T+ + +   +L S     L +RF  + L+  +  L V A L  +LT
Sbjct: 230 IMGQMGFDRGQYSNTMAMMALVSMLASFSTPFLLNRFKEKSLILFSQGLFVAAALVFILT 289

Query: 302 EFS----VFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLG 357
           +       FNL+  F ++     I F +  +  LSP  ++AG  S+L G  Q+  + L  
Sbjct: 290 QLGGVSHSFNLL-GFAFVCSGFSIGFGVTMSQALSPFVARAGVASSLLGIAQVCTSALYI 348

Query: 358 GYLVEHWVTSQNAMGVFYILVGITMLSVLIATKKAHSQPSAAQVP 402
             +    V++ N + +   +  +  +++++A  K        Q+P
Sbjct: 349 WVMGLLEVSAINILLLILSVGALVSITLMLAVPKMSEMVVNEQIP 393