Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., multidrug transporter EmrD from Klebsiella michiganensis M5al

 Score =  155 bits (392), Expect = 2e-42
 Identities = 103/376 (27%), Positives = 184/376 (48%), Gaps = 14/376 (3%)

Query: 14  MLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDA 73
           +L+ ++++A GQ+  +IY+P++  ++  L V + + Q ++  +LL +G SQLFYG LSD 
Sbjct: 10  LLMLVLLVAVGQMAQTIYIPAIADMAVSLNVREGAVQSVMAAYLLTYGVSQLFYGPLSDR 69

Query: 74  VGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGF 133
           VGRRP  L+G  I++L T++ +  +     L     +QG+G G   V+ R++ RD Y+G 
Sbjct: 70  VGRRPVILVGMSIFMLATLVAI-TTHSLPVLIAASAMQGMGTGVGGVMARTLPRDLYEGA 128

Query: 134 HLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETLP 193
            L  A S L++   + P++AP++GG L    +W++ F+F+L+    +       +PET P
Sbjct: 129 QLRHANSLLNMGILVSPLLAPLIGGILDTLWNWRACFVFLLVLCAGVTFSMARWMPETRP 188

Query: 194 YPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILP----FLLQKQLGMT 249
               R +   ++ NY  L      T + +   L  +  L  +++       L+   LG++
Sbjct: 189 TGAPRTR---LITNYKTLFG----TGAFNCYLLMLIGGLAGIAVFEACSGVLMGAVLGLS 241

Query: 250 AADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWL--LLTEFSVFN 307
           +       I+P      G+        RF           L+    +W+  LL   +V+ 
Sbjct: 242 SMSVSILFILPIPAAFFGAWFAGRPNKRFPTLMWQSVICCLLAGVLMWIPGLLGVMTVWT 301

Query: 308 LIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYLVEHWVTS 367
           L+          G+ FPLAT+  + P    AG   AL G +Q   +G+L         T 
Sbjct: 302 LLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLAWLSAMMPQTG 361

Query: 368 QNAMGVFYILVGITML 383
           Q ++G+  +L+G+ +L
Sbjct: 362 QGSLGLLMMLMGLLIL 377