Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (326), Expect = 9e-35
 Identities = 101/396 (25%), Positives = 177/396 (44%), Gaps = 17/396 (4%)

Query: 10  RRTPMLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGA 69
           RR  + + M ++    + + IYLPS+P ++ +  V  +  Q  + LFL   G  Q+  G 
Sbjct: 2   RRNLLPILMSLVLLSPLAIDIYLPSMPTMAAEFAVSASEVQSTLVLFLFAMGVGQILIGP 61

Query: 70  LSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDS 129
           L+D  GRRP  L G  +Y   ++L     + F  L+  R+LQGL A S S++  S +RD 
Sbjct: 62  LADRYGRRPVALFGVLLYGASSLLAAAAIE-FHWLQLARVLQGLAACSTSIVVFSAVRDC 120

Query: 130 YDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILP 189
           Y      +  SYL+    ++P +AP LGG LA    W+S F+F+ LY   +  L    LP
Sbjct: 121 YSPKEGARIYSYLNGAICVIPALAPTLGGLLAMQFGWRSTFVFMTLYAILMMLLVGYRLP 180

Query: 190 ETLP----YPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQ 245
           ET P          +W      Y  +L+N      A     +  A L  +S  P  L   
Sbjct: 181 ETRPANTVSSGPLYRWS----RYKPVLSNTHFLFYAFACMSAMAAILSYVSYSPVWLIGH 236

Query: 246 LGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTE--- 302
           LG++   +     + +   ++      ++  +   R     A+ L+V + + ++  +   
Sbjct: 237 LGVSELAFSGLFGLNALVNIVACFAAPVVIRKLGNRPTAILALVLLVLSAVLIIAAQAFG 296

Query: 303 -----FSVFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLG 357
                 + F  +     L I        AT++ LS    +AG  +A+ G IQM  A ++ 
Sbjct: 297 PSVGMAAAFAFMLPMMLLCIGFAFLLGPATSMALSAFGERAGTATAMLGFIQMSGASVIA 356

Query: 358 GYLVEHWVTSQNAMGVFYILVGITMLSVLIATKKAH 393
           G + +  +T+  A+ +   +  + +LS++  ++  H
Sbjct: 357 GLVQQTSLTAPYAVALVMGVFSVGLLSMMALSRFDH 392