Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., multidrug efflux system protein MdtL (RefSeq) from Shewanella sp. ANA-3

 Score =  124 bits (310), Expect = 6e-33
 Identities = 102/402 (25%), Positives = 181/402 (45%), Gaps = 34/402 (8%)

Query: 14  MLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDA 73
           +L    ++     G+ +YL  LP I+  L   +A   +  +++L G   + LF G+L+D 
Sbjct: 5   LLCCFGLVLMYPTGIDMYLVGLPQIANQLGATEAQLHIAFSVYLAGMATTMLFAGSLADR 64

Query: 74  VGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGF 133
           +GR+P  L    ++ L +      S         R +QG+GAG   V+  ++LRD+ D  
Sbjct: 65  IGRKPITLFSALLFALASYFAAR-SQSSDLFLVARFVQGVGAGCCYVVAFAILRDALDDK 123

Query: 134 HLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPE--- 190
              K LS ++    I+P+IAPV+G  +     W S+F  + +    +F L L +L E   
Sbjct: 124 RRAKVLSMVNGVTCIIPVIAPVIGHLIMLRFPWPSLFYTMAVMGLLVFGLCLFVLRETYS 183

Query: 191 -------TLPYPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQ 243
                  TLP  +     +G  I+   ++T   VT+  SY           +++ P L+ 
Sbjct: 184 KASFHSQTLPRVQTESFKQGFFISRV-VITTLGVTTILSY-----------VNVSPMLIM 231

Query: 244 KQLGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEF 303
            Q+G     Y +T+ + +   +L S     L ++F  + L+  + +L   A L  +LT+ 
Sbjct: 232 GQMGFDRGQYSNTMAMTALVSMLASFSTPFLLNQFKEKSLILFSQTLFAAAALVFILTQL 291

Query: 304 ----SVFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGY 359
                +FNL+  F  +     I F +  +  LSP  ++AG  S+L G  Q+  + L   Y
Sbjct: 292 GWLGQLFNLL-GFGLVCSGFAIGFGVTMSQALSPFVARAGVASSLLGIAQVCTSAL---Y 347

Query: 360 LVEHWVTSQNAMGVFYILVGITMLSVLIATKKAHSQPSAAQV 401
           +   WV     +    IL+ I  +  LI+     + P  +++
Sbjct: 348 I---WVMGLLEVSAINILLAILAVGALISITLMLAVPKLSEM 386