Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., multidrug resistance protein D (RefSeq) from Shewanella sp. ANA-3

 Score =  152 bits (384), Expect = 2e-41
 Identities = 123/395 (31%), Positives = 204/395 (51%), Gaps = 31/395 (7%)

Query: 14  MLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDA 73
           + + + ++A GQ+  +I++P+LPLI++ L VD +  Q ++  +LL +G  Q  YG LSD 
Sbjct: 26  LFMLVFMVACGQMAQTIFVPALPLIAQGLAVDASKLQAVMACYLLAYGLCQFIYGPLSDR 85

Query: 74  VGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGF 133
           VGR+   L+G GI++LG ++    +  F  L F  LLQGLG  SA  L RS+ RD Y G 
Sbjct: 86  VGRKMPLLIGIGIFILGALMAAEATS-FNQLIFASLLQGLGTASAGALCRSIPRDHYFGD 144

Query: 134 HLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMI-LPETL 192
           +L +  SY+S+    +P++AP LG + + +   Q+V+ +VL   G++  L L     E+L
Sbjct: 145 NLVRFNSYVSMAVVFLPLVAPFLGSFASAYWGVQAVY-WVLFGFGSLVWLLLCFGFKESL 203

Query: 193 PYPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTL--------SILPFLLQK 244
           P  KR  Q   I+ +Y  +L ++        ++ +YL SL+          +I   L  +
Sbjct: 204 PKHKREQQ--PILASYRHVLRHR--------SFRAYLLSLIATFAGIAAFEAIAGVLYGQ 253

Query: 245 QLGMTAADYGSTLIIPSSGLLLGSVLV-NMLTSRFSVRQ---LLGCAISLMVFAGLWLLL 300
            L ++        + P  G LLG+++      ++ +V Q   LLG     M+  G++ L+
Sbjct: 254 YLQLSPFMVSCYFVAPIPGYLLGALIAGRQKQAQRTVLQGVALLGAGALFMLIPGIFQLV 313

Query: 301 TEFSVFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYL 360
             +S+  LI +  + S A G+ FP  T+  L P   QAG   AL G +Q   AGL    +
Sbjct: 314 VGWSL--LIGSILFFSGA-GMLFPTLTSAALEPFPRQAGIAGALLGGLQNFGAGLAALTM 370

Query: 361 VEHWVTSQNAMGVFYILVGITMLSVLIATKKAHSQ 395
               +  Q ++G   +L  + +L V++A   A  Q
Sbjct: 371 SLVPMGGQLSIG---LLSALMVLLVIVALHYARDQ 402