Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., HTH-type transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

 Score =  139 bits (351), Expect = 6e-38
 Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 8/296 (2%)

Query: 1   MDWLQSAKTYIKVVEEGSFNGAARKLNTTSSAVSKRIHWLEERIGVQLLKRTTRSVTQTE 60
           MD L   + +  VV++G F  AA+K+  + SAVSK +  LE R+G +LL RTTR V+ TE
Sbjct: 1   MDRLTEMEAFANVVDQGGFTDAAKKMGISKSAVSKHVSSLEARLGARLLNRTTRRVSPTE 60

Query: 61  AGALFYQRAKAQLESWQSVVDETRSVNQTPAGLLRIGATLAVGSKFLMQYLDEFLQRYPD 120
            G  +Y RA+  L           S+   P+GLLRI      G   L   L +FL+ +PD
Sbjct: 61  IGLAYYDRARRVLNDAGEADALVTSMQSAPSGLLRISVATDFGVNHLSPVLSDFLRDFPD 120

Query: 121 IRVQLITTTPGQLPELHLDLF-ISREIEQLNSLSFKATPLFEYQAAFYASPSYLAKHGVP 179
           I V ++     +  EL  + F ++  I +L   S +A  L E      ASP+YL K G P
Sbjct: 121 ITVNMVLN--NRYVELISEGFDMALRIGELEDSSLRARKLTETTKRMIASPAYLEKFGRP 178

Query: 180 QTLQELTEHNVLCWGEQTFREV-----KTAQGKRLTLTGNFATTNPEALFYAGKAGMGII 234
           Q + +L  H +L +  Q+   +      + + +++  +G  +  + ++L  A  +G+GI 
Sbjct: 179 QKIDDLNMHKLLHYSNQSSGSMWKITAPSGEKRQVRTSGWLSVNDGQSLLNAAISGLGIA 238

Query: 235 VTGHIMIKEELKQGNLVRLLPDVTIDQATVYAYYPKLEYQHTRTQLFLDHLKQKLA 290
                +  + + +G +  ++P + ++   +YA YP   +   + + F+D L    A
Sbjct: 239 YLPSYLYSDAMAEGLVEDVMPSLPMETQGIYAVYPPGRFTQPKVRAFIDFLANAFA 294