Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  134 bits (338), Expect = 2e-36
 Identities = 84/289 (29%), Positives = 149/289 (51%), Gaps = 4/289 (1%)

Query: 2   DWLQSAKTYIKVVEEGSFNGAARKLNTTSSAVSKRIHWLEERIGVQLLKRTTRSVTQTEA 61
           +W +    ++ V E  SF  A ++L  +++ VS+++  LE+R+  +LL RTTR V+ TE 
Sbjct: 3   EW-EGVSEFVAVAETESFTKAGKRLGISTAQVSRQVGALEQRLDTKLLYRTTRKVSMTEE 61

Query: 62  GALFYQRAKAQLESWQSVVDETRSVNQTPAGLLRIGATLAVGSKFLMQYLDEFLQRYPDI 121
           G L+Y+  +  L+  +       S+   P GLLR+ A +A G K+++  +++FL  YP++
Sbjct: 62  GHLYYRHCRQVLDGLEEAERALSSLRGLPQGLLRMTAPVAYGEKYILPVVNDFLLAYPNV 121

Query: 122 RVQL-ITTTPGQLPELHLDLFISREIEQLNSLSFKATPLFEYQAAFYASPSYLAKHGVPQ 180
            V + +T    +L +  +DL I   I +L   S  A  + +      ASP YL + G P 
Sbjct: 122 EVDIALTNRQVRLVDAGIDLAI--RIGKLADSSLIAKRISQRINYVCASPDYLKRFGEPH 179

Query: 181 TLQELTEHNVLCWGEQTFREVKTAQGKRLTLTGNFATTNPEALFYAGKAGMGIIVTGHIM 240
           +L EL+ HN L      +R ++  + ++L + GN        L  A   G+G++   +  
Sbjct: 180 SLSELSRHNCLIGNHDYWRFLEQGRERQLKIKGNLRCNTGHGLRDAALKGLGLVQLPNYY 239

Query: 241 IKEELKQGNLVRLLPDVTIDQATVYAYYPKLEYQHTRTQLFLDHLKQKL 289
           I ++LK G LV +L         V+A YP+  +   + +L ++ L + L
Sbjct: 240 IGQDLKAGRLVSVLNAYQEPNEGVWALYPQNRHLSPKVKLMVEFLDRAL 288