Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  150 bits (378), Expect = 5e-41
 Identities = 91/296 (30%), Positives = 159/296 (53%), Gaps = 9/296 (3%)

Query: 1   MDWLQSAKTYIKVVEEGSFNGAARKLNTTSSAVSKRIHWLEERIGVQLLKRTTRSVTQTE 60
           ++ L+    +  V   GSF+ AARKL  + S VS ++  LE ++GVQL++RTTRS++ TE
Sbjct: 2   LELLEPIAIFTHVARAGSFSSAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTE 61

Query: 61  AGALFYQRAKAQLESWQSVVDETRSVNQTPAGLLRIGATLAVGSKFLMQYLDEFLQRYPD 120
           AG L Y + +  L      V    ++N    G+L++G + + G+  ++  L +F+ R+P+
Sbjct: 62  AGQLLYAQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPDFMARHPE 121

Query: 121 IRVQL-ITTTPGQLPELHLDLFISREIEQLNSLSFKATPLFEYQAAFYASPSYLAKHGVP 179
           + +Q+ +      +    LDL ++   EQL  L   A PL + Q    ASP Y+AKHG P
Sbjct: 122 LELQVSLLDHKVDVVSEGLDLLLTMS-EQL-PLGMVARPLMKCQFLLAASPEYVAKHGYP 179

Query: 180 QTLQELTEHNVLC----WGEQTFREVKTAQGK-RLTLTGNFATTNPEALFYAGKAGMGII 234
           +  ++L +HN L     W E +  + K       + ++GNF   N  AL  A  +G+G++
Sbjct: 180 ERPEQLVDHNCLVYHGEWHEHSVWQFKKGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVV 239

Query: 235 VTGHIMIKEELKQGNLVRLLPDVTI-DQATVYAYYPKLEYQHTRTQLFLDHLKQKL 289
                +++ E+++G LV LLP+  +     + A YP+ ++   +   F+D +K  +
Sbjct: 240 YLASYLLENEIEKGTLVPLLPEWQLTHHLPLQAVYPRRKHLAPKVSAFIDFIKDHI 295