Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  136 bits (343), Expect = 5e-37
 Identities = 83/281 (29%), Positives = 144/281 (51%), Gaps = 3/281 (1%)

Query: 10  YIKVVEEGSFNGAARKLNTTSSAVSKRIHWLEERIGVQLLKRTTRSVTQTEAGALFYQRA 69
           ++ V E  +F  AA++LN +++ VS++I  LE R+G +L  RTTR V+ TE G ++Y+  
Sbjct: 10  FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69

Query: 70  KAQLESWQSVVDETRSVNQTPAGLLRIGATLAVGSKFLMQYLDEFLQRYPDIRVQL-ITT 128
           +      +        +  +P GL+++ A +A G KF+M  L++F+ +YP +   + +T 
Sbjct: 70  RQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVDLTN 129

Query: 129 TPGQLPELHLDLFISREIEQLNSLSFKATPLFEYQAAFYASPSYLAKHGVPQTLQELTEH 188
               L E   DL I   + +L   S  A PL        ASPSY+ K+G P TL EL +H
Sbjct: 130 RTLDLIEGGYDLAI--RLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELNQH 187

Query: 189 NVLCWGEQTFREVKTAQGKRLTLTGNFATTNPEALFYAGKAGMGIIVTGHIMIKEELKQG 248
           N L      +R ++  + +   + G     +  AL  A   G+GI+      I+E++  G
Sbjct: 188 NCLIGNHNYWRFIEHGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYIEEDIHAG 247

Query: 249 NLVRLLPDVTIDQATVYAYYPKLEYQHTRTQLFLDHLKQKL 289
            L+  L      +  ++A YP+  +   + ++ +D+L +KL
Sbjct: 248 RLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEKL 288