Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  163 bits (412), Expect = 5e-45
 Identities = 100/306 (32%), Positives = 164/306 (53%), Gaps = 19/306 (6%)

Query: 1   MDWLQSAKTYIKVVEEGSFNGAARKLNTTSSAVSKRIHWLEERIGVQLLKRTTRSVTQTE 60
           M+   +   ++ VVE GSF+ A +KL  + SA+SKRI  LE+ +G+QLL+RTTRS++ T+
Sbjct: 1   MEHFSALPIFVTVVECGSFSAAGQKLGLSKSAISKRITQLEQHLGIQLLQRTTRSLSLTD 60

Query: 61  AGALFYQRAKAQLESWQSVVDETRSVNQTPAGLLRIGATLAVGSKFLMQYLDEFLQRYPD 120
           AGA +++  +  ++  Q  +D    + QTP G LRI   +  G  ++   + EFL+RYPD
Sbjct: 61  AGARYFEYIRPAVQLTQEGLDAISELQQTPKGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120

Query: 121 IRVQLITTTPGQLPELHLDLF-----ISREIEQLNSLSFKATPLFEYQAAFYASPSYLAK 175
           I++Q+      Q+ +   DL      ++  I +L   S  A  +    +   ASP+YLA+
Sbjct: 121 IQLQM------QMDDKTTDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLAQ 174

Query: 176 HGVPQTLQELTEHNVLCWG------EQTFREVKTAQGKRLTLTGNFATTNPEALFYAGKA 229
           HG P T   LT+HN L +       E +F      Q  R+   GN+   N +A+  A   
Sbjct: 175 HGSPMTPSGLTQHNCLFYSYFQDGVEWSFHSPYGVQ--RVQPKGNYQVNNSDAIHQACLD 232

Query: 230 GMGIIVTGHIMIKEELKQGNLVRLLPDVTIDQATVYAYYPKLEYQHTRTQLFLDHLKQKL 289
           G+GI      +++ +L+ G L  +L D  + +  +YA YP+ +Y  T+  + +  L +KL
Sbjct: 233 GLGIANLPRFIVESDLQAGRLQTILTDFPLPEHGIYAVYPQRKYLPTKVTVLIGFLMEKL 292

Query: 290 AVAKAI 295
           A  K +
Sbjct: 293 ASGKFV 298