Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  221 bits (562), Expect = 9e-62
 Identities = 140/453 (30%), Positives = 231/453 (50%), Gaps = 16/453 (3%)

Query: 163 KQMEVRSQSLINQLRHEISHDNLTGLMNRNDLAEKLTALVQEDRHH---FTLAFLDIDEF 219
           + +E R Q L+ ++ H + +D LT L N   L ++LT  + + R H     + F+ +D F
Sbjct: 175 RTIEERVQELL-KVSHLLQYDVLTELPNSMLLGDRLTQAMAQCRRHDRQLAVMFIGLDRF 233

Query: 220 RSINDLHGHYLGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTD----REPMKICQT 275
           + IN+  GH +GD +LK VA A+   V E    FR  +DEF  +  D    ++   +   
Sbjct: 234 KRINNALGHPVGDEMLKRVARALATVVRESDSVFRYGSDEFVVVLGDIVDPQQTKGVADK 293

Query: 276 ILNKLAQDYIDQDRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYD 335
           +L  ++         L ++ S+GI+ Y  +  +A  L+  A  A++  K       RF+ 
Sbjct: 294 LLAAISSPQPIDGHDLTVTASLGISVYPSDGFDAVALIKKAETAMRNVKETGPNDYRFFT 353

Query: 336 NLLSNQYYRRTQIIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLG 395
             ++    RR +  + + S L   + + E  +  QP +          E L RWN    G
Sbjct: 354 EDMN----RRARQQQTIESGLRLGLQRKEFVLHYQPKLDLKSGKVVGVEALVRWNRPDHG 409

Query: 396 VVTPLEFIEAAEQSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRY 455
           +V P +FI  AE SGLIV   + +L+ AC      +    + + LS+N SA +      +
Sbjct: 410 LVYPSDFIPVAEDSGLIVPLSQWVLQEACQQACRWQAQGMRPLYLSVNVSAIDFRQRG-F 468

Query: 456 LEHLLKTIKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSL 515
           +E + +T+K  G    +  +E+TE+VL+       +IL  +++LG ++A+DDFGTGYSSL
Sbjct: 469 VEGIARTLKETGLAPTQLELEITESVLMQNVDTTVAILKAIKQLGIRLAIDDFGTGYSSL 528

Query: 516 NYIHSYPIDCIKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLY 575
           +Y+  +P+D +KID +FV +L  +     +V  II L   L L ++AEGVE  + L+ L 
Sbjct: 529 SYLQKFPVDVLKIDQSFVGDLSIDSNDAKLVSTIISLGKSLNLHIIAEGVETLEQLEFLK 588

Query: 576 QMGCEQIQGYYFSRPDLPSVMIE---RWRKETN 605
           +  CE++QGYYFS+   P    +    W K  N
Sbjct: 589 KHHCEEVQGYYFSKAVEPQAFADWMTEWEKRQN 621