Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., sensory box/GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  221 bits (562), Expect = 2e-61
 Identities = 143/423 (33%), Positives = 216/423 (51%), Gaps = 12/423 (2%)

Query: 175  QLRHEISHDNLTGLMNRNDLAEKLTALV---QEDRHHFTLAFLDIDEFRSINDLHGHYLG 231
            +L ++  HD LTGL NR     +L A +   QE+     + FLD+D F+ IND  GH +G
Sbjct: 802  RLDYQAHHDPLTGLPNRTLFESRLLAALNGQQENGSQGAVLFLDLDRFKHINDSLGHPVG 861

Query: 232  DLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDREPMK----ICQTILNKLAQDYIDQ 287
            DL+LK +A  +++ + +     R+  DEF  L    +       I Q +LN  A  +   
Sbjct: 862  DLLLKGIAVRLREQLRDIDTVARLGGDEFIILLPGLQQPSDAEHIAQKLLNCFAAPFQAG 921

Query: 288  DRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQ 347
            +    IS SIG + Y  +  +   L+ NA  A+   K     R+  Y   L+ Q   R  
Sbjct: 922  EHEFFISASIGTSLYPQDGCDVATLVKNADAAMYRSKAKGRNRVESYTRDLTAQASERV- 980

Query: 348  IIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAE 407
               AL  EL + I + EL +  QP +          E L RW   T G V P  FI  AE
Sbjct: 981  ---ALEHELRRAIERNELSLSFQPKISLVDNQLVGAEALIRWTHPTFGDVPPEHFIPLAE 1037

Query: 408  QSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYG 467
            ++G+I++ G+ +LE AC    E     D    LS+N +  +L   N  L  + + ++ + 
Sbjct: 1038 ENGMILQIGDWVLERACRQLCEWNDAYDSLGPLSVNLAGAQLRQPN-LLGRIEQLLREHQ 1096

Query: 468  FQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIK 527
             +     +E+TE  ++S+A E  ++L  L++LG ++A+DDFGTGYSSL+Y+   P+D +K
Sbjct: 1097 LEPGLLQLEITENFIMSQAEEALTVLHQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILK 1156

Query: 528  IDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYF 587
            ID +FVR L  +    +IV  II L   ++  ++AEGVE       L + GCEQIQGY  
Sbjct: 1157 IDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTIIAEGVETLAQQQFLTEEGCEQIQGYIV 1216

Query: 588  SRP 590
            S P
Sbjct: 1217 SLP 1219