Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  231 bits (588), Expect = 1e-64
 Identities = 155/481 (32%), Positives = 253/481 (52%), Gaps = 17/481 (3%)

Query: 122 FSNGENYGVLISTFTRQLDDFANL----VLVHQILAQMIAHDLECKQMEV-RSQSLINQL 176
           FS+G   G L     + LD+   +    VL   +L  ++   LE +  E+ +S +L N+ 
Sbjct: 198 FSDGSFCGSLDGLSGKGLDNLVLITTLAVLAIALLTSILDARLEARTAELAQSLTLANRE 257

Query: 177 RHEIS-HDNLTGLMNRNDLAEKLTAL---VQEDRHHFTLAFLDIDEFRSINDLHGHYLGD 232
             +++ HD LTGL NR  LA+++      VQE    F L F+D+D F+ +ND  GH++GD
Sbjct: 258 LTQLALHDPLTGLPNRVLLADRIDQAMHRVQEQGGCFALMFIDLDGFKPVNDAFGHHMGD 317

Query: 233 LVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDREP---MKICQTILNKLAQDYIDQDR 289
           L+L+ VA  +++ +  +    RI  DEF  L    EP   +++    +  +A+ +   + 
Sbjct: 318 LLLRDVALRLREDLRSQDTLARIGGDEFVLLVQLAEPDDALRLAARQVGLIARTFRVAEH 377

Query: 290 RLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQII 349
            L+IS S+GI  Y G   +AD+LL NA  A+   K        F+D  +++   ++ Q++
Sbjct: 378 DLQISASVGIALYPGNGQSADELLMNADAAMYHAKGAGKNGYSFFDASMNSNARKQLQLL 437

Query: 350 EALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAEQS 409
           + LR      + Q +  +  QP            E L RW+  T G++ P  FI+ AE++
Sbjct: 438 QDLRIA----VEQRQFSLYYQPKFDAANGQPVGAEALLRWSHPTQGLLMPDTFIDLAEKT 493

Query: 410 GLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYGFQ 469
           GLI+  GE +L  AC   +E         R+++N SA +  H+   ++ + K ++ +   
Sbjct: 494 GLIIPIGEWVLNEACRQMREWYVLGYTDWRIAVNLSALQFCHTG-LVQSVAKALETHQLP 552

Query: 470 ADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIKID 529
           A+  T+E+TET  +S A    ++L  L ++G  +++DDFGTGYSSL Y+   P + +KID
Sbjct: 553 ANSLTLEITETTAMSDADASMTVLQQLSDMGVDLSIDDFGTGYSSLMYLKRLPANELKID 612

Query: 530 AAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYFSR 589
             FVR+L  +    +IV  I+ L   L L +VAEGVE     D L Q+GC+ +QGY    
Sbjct: 613 RGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVETDVQQDFLTQLGCDSLQGYLLGH 672

Query: 590 P 590
           P
Sbjct: 673 P 673