Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N1B4

 Score =  220 bits (561), Expect = 1e-61
 Identities = 149/464 (32%), Positives = 237/464 (51%), Gaps = 24/464 (5%)

Query: 144 NLVLVHQILAQMIAHDLECKQMEVRSQSLINQLRHEIS-----------HDNLTGLMNRN 192
           NLVL+  +    IA  L    ++ R ++    L H ++           HD LTGL NR 
Sbjct: 218 NLVLITTLAVLSIA--LLTSILDARLEARTADLAHSLTEANRELTQLALHDTLTGLPNRV 275

Query: 193 DLAEKLT---ALVQEDRHHFTLAFLDIDEFRSINDLHGHYLGDLVLKFVADAIKQAVPEE 249
            LA+++    + VQE    F L F+D+D F+ +ND  GH++GD +L+ V   +++ +  +
Sbjct: 276 LLADRIDQAMSRVQEQGGCFALMFIDLDGFKPVNDAFGHHMGDQLLREVGLRLREDLRSQ 335

Query: 250 GYAFRIAADEFAFLTTDREP---MKICQTILNKLAQDYIDQDRRLKISVSIGITKYSGEK 306
               RI  DEF  L    EP   + +    +  +A+ +   +  L+IS S+GI  Y G  
Sbjct: 336 DTLARIGGDEFVLLVQLAEPNDALNLAARQVGLIARSFRVAEHDLQISASVGIALYPGNG 395

Query: 307 LNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQIIEALRSELSKPIHQTELY 366
             A++LL NA  A+   K        F+D  +++   ++ Q+++ LR+ L +   Q  LY
Sbjct: 396 QTAEELLMNADAAMYHAKGAGKNGHSFFDASMNSNARKQLQLLQDLRNALDQ--QQFSLY 453

Query: 367 VVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAEQSGLIVEFGERILELACIA 426
              QP            E L RW   T G++ P  FI+ AE++GLI+  GE +L  AC  
Sbjct: 454 Y--QPKFDAGHGRPVGAEALLRWEHPTQGMLQPDSFIDLAEKTGLIIPIGEWVLNEACRQ 511

Query: 427 KQELEQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYGFQADEFTIELTETVLLSKA 486
            +E         R+++N SA +  H+   ++ + K +  +   A+  T+E+TET  +S A
Sbjct: 512 MREWYVLGYTDWRIAVNLSALQFCHAG-LVQSVAKALATHHLPANSLTLEITETTAMSDA 570

Query: 487 AEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIKIDAAFVRNLLTNQTSESIV 546
               ++L  L ++G  +++DDFGTGYSSL Y+   P + +KID  FVR+L  +    +IV
Sbjct: 571 DASMTVLQELSDMGVDLSIDDFGTGYSSLMYLKRLPANELKIDRGFVRDLEHDSDDAAIV 630

Query: 547 WLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYFSRP 590
             I+ L   L L +VAEGVE     D L Q+GC+ +QGY    P
Sbjct: 631 SAIVALGQALGLRIVAEGVETGVQQDFLTQLGCDSLQGYLLGHP 674