Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1248 a.a., sensory box/GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N1B4

 Score =  219 bits (558), Expect = 6e-61
 Identities = 146/423 (34%), Positives = 216/423 (51%), Gaps = 12/423 (2%)

Query: 175  QLRHEISHDNLTGLMNRNDLAEKL-TAL--VQEDRHHFTLAFLDIDEFRSINDLHGHYLG 231
            +L ++  HD LTGL NR     +L TAL   QE+     + FLD+D F+ IND  GH +G
Sbjct: 803  KLDYQAHHDPLTGLPNRTLFESRLLTALNSQQENGGQGAVLFLDLDRFKHINDSLGHPVG 862

Query: 232  DLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDREPMK----ICQTILNKLAQDYIDQ 287
            DL+LK +A  +K+ + +     R+  DEF  L    +       I   +LN  +  +   
Sbjct: 863  DLLLKGIAVRLKEQLRDIDTVARLGGDEFIILLPGLQQSSDADNIATKLLNCFSAPFQAG 922

Query: 288  DRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQ 347
            +    IS SIG + Y  +  +   L+ NA  A+   K     R+  Y   L+ Q   R  
Sbjct: 923  EHEFFISASIGTSLYPKDGCDVATLVKNADAAMYRSKAKGRNRVESYTRDLTAQASERV- 981

Query: 348  IIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAE 407
               AL  EL + I + EL++  QP +          E L RW+  T G V P  FI  AE
Sbjct: 982  ---ALEHELRRAIERNELFLYYQPKISLDDHRVVGAEALIRWHHPTFGDVPPEHFIPLAE 1038

Query: 408  QSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYG 467
            ++G+I++ G+ +LE AC    E  Q  +    LS+N +  +L   N  L  + + +K   
Sbjct: 1039 ENGMILQIGDWVLETACRQMYEWNQVYECLGPLSVNLAGAQLRQPN-LLGRIEQLLKDNH 1097

Query: 468  FQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIK 527
                   +E+TE  ++S+A E  ++L  L+ LG ++A+DDFGTGYSSL+Y+   P+D +K
Sbjct: 1098 LNPGFLQLEITENFIMSQAEEALAVLHQLKRLGVQLAIDDFGTGYSSLSYLKRLPLDILK 1157

Query: 528  IDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYF 587
            ID +FVR L  +    +IV  II L   ++  ++AEGVE Q     L   GCEQIQGY  
Sbjct: 1158 IDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTVIAEGVETQAQQQFLTAEGCEQIQGYIV 1217

Query: 588  SRP 590
            S P
Sbjct: 1218 SLP 1220