Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 828 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  220 bits (560), Expect = 2e-61
 Identities = 148/428 (34%), Positives = 219/428 (51%), Gaps = 22/428 (5%)

Query: 175 QLRHEISHDNLTGLMNRNDLAEKLTALVQEDRHHFTLA---FLDIDEFRSINDLHGHYLG 231
           +L ++  HD LTGL NR     +L A +       +L    FLD+D F+ IND  GH +G
Sbjct: 383 RLDYQAHHDPLTGLPNRILFESRLQAALLHSEESGSLGAVLFLDLDRFKHINDSLGHPVG 442

Query: 232 DLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDREPMKICQTILNKL----AQDYIDQ 287
           DL+LK +A  +K+ + +     R+  DEF  L          Q I NKL    +  +   
Sbjct: 443 DLLLKGIAHRLKETLRDIDTVARLGGDEFIVLLPGLLQTSDAQAIANKLLACFSTPFEAG 502

Query: 288 DRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQ 347
           +  L IS SIG   +  +  +   L+ NA  A+   K     R+  Y   LS+Q   R  
Sbjct: 503 EHELYISPSIGSCVFPTDGTDVATLVKNADAAMYRSKAKGRNRVESYTCDLSDQASERI- 561

Query: 348 IIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAE 407
              AL  EL + + + +L +  QP +          E L RWN  T G V P  FI  AE
Sbjct: 562 ---ALEQELRRALERNQLTLAYQPKIDLLTHTMAGAEALIRWNHPTFGEVPPEHFIPLAE 618

Query: 408 QSGLIVEFGERILELACIAKQELEQGIDQKI-----RLSINCSADELTHSNRYLEHLLKT 462
           ++G+I++ G+ +LE AC      + GI +K       LS+N +  +L  +N  LE + + 
Sbjct: 619 ENGMILQIGDWVLEQAC-----RQMGIWRKTCQPFGPLSVNLAGAQLRQTN-LLERIEQL 672

Query: 463 IKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYP 522
           +   G +     +E+TE  ++S+  E  ++L  L+ LG ++A+DDFGTGYSSL+Y+   P
Sbjct: 673 LTDNGLEPGCLQLEITENFIMSQTQEALAVLHQLKTLGVQLAIDDFGTGYSSLSYLKRLP 732

Query: 523 IDCIKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQI 582
           +D +KID +FVR L  +    +IV  II L   L+L ++AEGVEN +    L   GCEQI
Sbjct: 733 LDILKIDQSFVRGLPEDTHDAAIVRAIIALGRSLQLTVIAEGVENSEQQQFLTSEGCEQI 792

Query: 583 QGYYFSRP 590
           QGY  S P
Sbjct: 793 QGYIISLP 800