Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  231 bits (589), Expect = 1e-64
 Identities = 143/454 (31%), Positives = 239/454 (52%), Gaps = 13/454 (2%)

Query: 152 LAQMIAHDLECKQMEVRSQSLINQLRHEISHDNLTGLMNRN---DLAEKLTALVQEDRHH 208
           LA  I H +  K+     +     L H+ ++D+LT L NR+   D   + TAL +     
Sbjct: 457 LAGQIIHFVAVKEDITEQKRNRELLDHQANYDSLTDLPNRSLALDRLRQATALSERSNDT 516

Query: 209 FTLAFLDIDEFRSINDLHGHYLGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDRE 268
             +  LD+D F++IND  GH  GD +L+ +A  ++  +P E    R+  DEF  +    +
Sbjct: 517 VIVMLLDLDRFKNINDTLGHSYGDCLLQEIAKRLRYHLPREITISRLGGDEFLIICPAVK 576

Query: 269 PM----KICQTILNKLAQDYIDQDRRLKISVSIGITKYSGEKLNADQLLFNASLALKECK 324
                 K+ Q +L  ++Q    +   L I+ SIG+  Y  + +  + L+ NA  A+   K
Sbjct: 577 ENIHLEKLSQQLLKIISQPITIEAEELVITASIGVACYPNDGVTPEVLMRNADTAMYSAK 636

Query: 325 RNHNTRIRFYDNLLSNQYYRRTQIIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFE 384
           RN     + +   ++ + + R Q    L + L   + Q +L V  QPI+     +    E
Sbjct: 637 RNGGNDFQLFMPTMNAEAHARIQ----LETHLRHALEQYQLKVFYQPIISLQDNHVVGLE 692

Query: 385 ILTRWNSSTLGVVTPLEFIEAAEQSGLIVEFGERILELACIAKQELEQGIDQKIRLSINC 444
            L RW+   LG + P  FI  AE++GLI+  G R++E AC      +Q  +    +++N 
Sbjct: 693 ALARWHDPELGNIPPDRFIPIAEETGLIIPLGYRVIEQACQDVAIWQQKYNYPFWVAVNL 752

Query: 445 SADELTHSNRYLEHLLKTIKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIA 504
           S  +L  SNR+ +   K ++ + F+ +   +E+TE +LL   + +  +L  L   G  +A
Sbjct: 753 SPRQL-RSNRFTQITAKILQRHNFRPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALA 811

Query: 505 LDDFGTGYSSLNYIHSYPIDCIKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEG 564
           LDDFGTGYS+L+Y+  YP   +K+D +F+R++  +  S ++V  I+ +A+ L +  VAEG
Sbjct: 812 LDDFGTGYSALSYLRRYPFQSLKVDQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEG 871

Query: 565 VENQQALDKLYQMGCEQIQGYYFSRPDLPSVMIE 598
           VE  + ++ L  +GCE  QGY+FSRP LP+V I+
Sbjct: 872 VETAEQVEFLKAIGCEYGQGYWFSRP-LPAVEID 904