Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 929 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  231 bits (589), Expect = 1e-64
 Identities = 152/478 (31%), Positives = 240/478 (50%), Gaps = 16/478 (3%)

Query: 123 SNGENYGVLISTFTRQLDDFANLVLVHQILAQM--IAHDLECKQMEVRSQSLINQLRHEI 180
           S  EN  V+I  F +    F N + +  I      + H +  +      +    +L    
Sbjct: 439 SQAENVHVVIRNFRKDGQPFWNDLYISPIFNAQGNVTHFIGVQNDITEQKRYEEELSFSA 498

Query: 181 SHDNLTGLMNRNDLAEKLTA---LVQEDRHHFTLAFLDIDEFRSINDLHGHYLGDLVLKF 237
           SHD LTGL NR  L ++L     +    +H   + F+D+D F+ IND  GH  GDL+L  
Sbjct: 499 SHDVLTGLPNRAVLEDRLRQGCKMALRQKHSLAILFIDLDGFKLINDSIGHRSGDLLLVE 558

Query: 238 VADAIKQAVPEEGYAFRIAADEFAFLTTD----REPMKICQTILNKLAQDYIDQDRRLKI 293
           VA  + + V       RI  DEF  L  D     + + I   +L  +A+ Y  Q   L +
Sbjct: 559 VAQRMCEQVRAGDTVARIGGDEFIILLVDLKLENDVISIADRLLASVARPYHIQGIYLHV 618

Query: 294 SVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQIIEALR 353
           + S+GIT   G+     QL+  A LA+ + K+      ++Y N L+ +   R      LR
Sbjct: 619 TASMGITLSDGDIEQPTQLIQQADLAMYKAKQEGRNNYQWYTNDLNLRLRERVH----LR 674

Query: 354 SELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAEQSGLIV 413
           +EL K I      +  QP ++         E L RW    +G ++P  F+  AE +G I+
Sbjct: 675 NELQKAIETEAFELYFQPKIEGCSGQVIGLEALLRWQHPQMGFISPATFVPIAEDTGQII 734

Query: 414 EFGERILELACIAKQEL-EQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYGFQADE 472
              + +LE AC   ++L +QGI     +++N S  +    N +++ +   ++ Y  +++ 
Sbjct: 735 PLSQWVLETACRQLRDLLQQGIAAP-SVAVNISTVQFRRIN-FVKSVQSALQKYQLKSEH 792

Query: 473 FTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIKIDAAF 532
             IE+TE VL     +    L  L+ELG  I++DDFGTG+SSL+Y+   PID +KID +F
Sbjct: 793 LEIEITENVLFDNTEKAIEKLQRLKELGVNISIDDFGTGFSSLSYLKELPIDTVKIDRSF 852

Query: 533 VRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYFSRP 590
           V+ + T+    +I   II +A+ L+L++VAEGVE +Q    L Q  C+Q QGYYF++P
Sbjct: 853 VQEINTDSRDAAITQGIISMAHHLRLNVVAEGVETEQQFKFLQQSNCDQYQGYYFAKP 910