Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1047 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) from Synechococcus elongatus PCC 7942

 Score =  251 bits (642), Expect = 8e-71
 Identities = 164/524 (31%), Positives = 266/524 (50%), Gaps = 36/524 (6%)

Query: 81   EQVGLQRQPYCLFASKVAELFPNDAYLVENHIEAYLG--IPIYFSNGENYG--VLISTFT 136
            E VG  + PY  F  +  +   ++A     H    +G  +PI +   +  G  +   T T
Sbjct: 533  EMVG--QNPYDFFHPEDCDRIRDEA-----HQAVLMGAELPIVYRMRKKLGGYIWFETLT 585

Query: 137  RQLDDFANLVLVHQILAQMIAHDLECKQMEVRSQSLINQLRHEISHDNLTGLMNRNDLAE 196
            + + D   +V+  Q  ++ +   +E +          NQL+++  HD+LTGL NRN L E
Sbjct: 586  KPIMDDQGVVIGLQTTSRDVTQRIEIQ----------NQLQYDACHDSLTGLANRNLLIE 635

Query: 197  KLTALVQEDR----HHFTLAFLDIDEFRSINDLHGHYLGDLVLKFVADAIKQAVPEEGYA 252
            +L   ++  +    + + + FLD+D F+ IND  GH  GD +L  +A  ++  +     A
Sbjct: 636  RLELSLKRSKRLQNYKYAVLFLDLDRFKVINDSLGHITGDQLLVSIAQKLQSIIRSHDLA 695

Query: 253  FRIAADEFAFLTTD----REPMKICQTILNKLAQDYIDQDRRLKISVSIGITKYSGEKLN 308
             R+  DEF  L  D     EP+K+ + IL  +      ++R +  S SIGI   S E  +
Sbjct: 696  ARLGGDEFVVLVEDIQTFDEPIKVAERILAAIQVPLELEERSIYTSTSIGIVFGSHEYES 755

Query: 309  ADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQIIEALRSELSKPIHQTELYVV 368
            A QLL +A  A+   K     R   +D+ + +Q   R      L ++L + I + E  + 
Sbjct: 756  ATQLLRDADTAMYRAKSRGRARYEVFDSAMHSQALARLH----LENDLRQAIARQEFVLY 811

Query: 369  VQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAEQSGLIVEFGERILELACIAKQ 428
             QPI++        FE L RW   T G+  P++ I  AE++GLI      +L  AC    
Sbjct: 812  YQPIIQLQTGKITGFEALIRWQHPTEGIKLPIDLIPIAEETGLITSIDYWVLNQACRQLS 871

Query: 429  ELEQGIDQK--IRLSINCSADELTHSNRYLEHLLKTIKAYGFQADEFTIELTETVLLSKA 486
            E +    Q   + +S+N SA  L H +  ++ +   ++A   +    T+E+TE++L+   
Sbjct: 872  EWQASYSQAADLSMSVNLSAQNLQHDH-LMDEIQSVLQATKIKPGSLTLEITESMLIENT 930

Query: 487  AEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIKIDAAFVRNLLTNQTSESIV 546
             +   +L  + E G +I++DDFGTGYSSL+Y+H  P++ +K+D +FVR + T  T+  IV
Sbjct: 931  DQTIQLLAAINEQGIEISIDDFGTGYSSLSYLHKLPVNNLKVDGSFVRKITTESTNYQIV 990

Query: 547  WLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYFSRP 590
              II L NQL L  +AEG+E  + LD L Q+G +  QGY F+RP
Sbjct: 991  NTIIALNNQLGLKAIAEGIETHEQLDLLSQLGYQYGQGYLFARP 1034