Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 751 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  230 bits (586), Expect = 2e-64
 Identities = 149/436 (34%), Positives = 229/436 (52%), Gaps = 18/436 (4%)

Query: 171 SLINQLRHEIS----HDNLTGLMNRNDL---AEKLTALVQEDRHHFTLAFLDIDEFRSIN 223
           SL+ Q   E++    HD LT L NR+ L   +++   L    +    L  +D+D F+ IN
Sbjct: 313 SLLKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAANRKTRLALLLIDVDLFKHIN 372

Query: 224 DLHGHYLGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTT--DREPMKICQTILNKLA 281
           D  GH  GD VL  +++ +   +  E    RI  DEF  LT    R+ + +  + + +  
Sbjct: 373 DSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVLLTQVRRRDDIPVILSAIQRAF 432

Query: 282 QDYID--QDRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLS 339
               D  +   +++S SIGI  Y  +  N D LL NA  A+   K+    R  FY   ++
Sbjct: 433 DTSFDTSEGESVRLSASIGIAVYPDDGDNPDTLLKNADAAMYRAKQQGRNRHAFYTEQMT 492

Query: 340 NQYYRRTQIIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTP 399
               ++ ++  ALR      +  + L +V QP +    R     E L RW    LGVV+P
Sbjct: 493 QSSMQQLRLQTALRGA----VKNSALSLVYQPKINLRTRKLIGVEALCRWTDHELGVVSP 548

Query: 400 LEFIEAAEQSGLIVEFGERILELACI-AKQELEQGIDQKIRLSINCSADELTHSNRYLEH 458
            EFI  AE  GL+ E G  +L+ AC  A+   +QG++   R+++N S  +LT  N + + 
Sbjct: 549 AEFIPVAESIGLMPEIGLWVLKEACRQARIWRDQGLNPG-RMAVNVSGSQLTGDN-FADS 606

Query: 459 LLKTIKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYI 518
           + + +   G   D   +E+TE+V+L   A     +  LR +G  +ALDDFGTGYSSL+Y+
Sbjct: 607 VARVLTQTGLSPDALELEITESVVLDNPASAIDTMDKLRGMGVSLALDDFGTGYSSLSYL 666

Query: 519 HSYPIDCIKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMG 578
              P++ +KID +FVR L T+Q S +I   II +   LKL ++AEGVEN+   + L ++G
Sbjct: 667 RKLPLNKLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLGVIAEGVENETQAEFLLRLG 726

Query: 579 CEQIQGYYFSRPDLPS 594
           C + QGY F+RP L S
Sbjct: 727 CTEAQGYLFARPLLAS 742