Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 974 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  219 bits (559), Expect = 3e-61
 Identities = 133/431 (30%), Positives = 233/431 (54%), Gaps = 19/431 (4%)

Query: 182 HDNLTGLMNRNDLAEKLT---ALVQEDRHHFTLAFLDIDEFRSINDLHGHYLGDLVLKFV 238
           HD LTGL NR  L ++LT   A    + H   + F+D+D F++IND  GH +GD ++K V
Sbjct: 533 HDPLTGLPNRMLLQDRLTVAIAAAAREGHEVGVLFIDLDRFKTINDSLGHSVGDELIKGV 592

Query: 239 ADAIKQAVPEEGYAFRIAADEFAF----LTTDREPMKICQTILNKLAQDYIDQDRRLKIS 294
              ++ AV E     R+  DEF      +    +   +   +L +L   +    + L+++
Sbjct: 593 TKRLQDAVRESDTVSRLGGDEFIVVLHRIRRSEDAAHVADAVLAQLTAPFNIAGKELRVT 652

Query: 295 VSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQIIEALRS 354
            SIGI+ +  +  + + L+ NA  A+   K       +F+   ++ +   R     AL +
Sbjct: 653 ASIGISVFPADGEDEEGLIKNADTAMFHAKERGRNNYQFFRPEMNARAGERL----ALEN 708

Query: 355 ELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAEQSGLIVE 414
            L   + + E  +  QP V+         E L RW     G V+P +FI  AE++G I+E
Sbjct: 709 SLRGAVQRKEFVLFYQPQVEIRSGRLVGAEALIRWRRGDSGFVSPADFIPLAEETGTILE 768

Query: 415 FGERILELACIAKQELEQ-----GIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYGFQ 469
            G+ +L  AC  + + +Q     G+ + + +++N S+ +    + + E+LL  +  Y   
Sbjct: 769 IGDWVLAEACRQQVQWDQQWPAMGL-KPVPVAVNLSSLQFRQKH-FKENLLDIVGDYPLP 826

Query: 470 ADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIKID 529
           A    +ELTE++++ +  +V ++L  L++ G ++++DDFGTGYSSL+Y+  +P+D +KID
Sbjct: 827 AGRIELELTESIVMEEPEQVGAVLAELKQAGLRLSIDDFGTGYSSLSYLKRFPLDKLKID 886

Query: 530 AAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYFSR 589
           A+FVR+++ +    +IV  ++ L + L L +VAEGVE++  L  L  MGC+  QGY+F R
Sbjct: 887 ASFVRDIVNDSADLAIVHAVVSLGHSLGLKVVAEGVEHEAELLILNAMGCDIAQGYHFCR 946

Query: 590 PDLPSVMIERW 600
           P +P+   + W
Sbjct: 947 P-VPAEEFQAW 956