Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 663 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  224 bits (572), Expect = 7e-63
 Identities = 142/444 (31%), Positives = 230/444 (51%), Gaps = 20/444 (4%)

Query: 172 LINQLRHEISHDNLTGLMNRNDLAEKLTALVQEDRHHF----TLAFLDIDEFRSINDLHG 227
           ++ Q++H+  HD LTGL NR    +++   +   R        +AFLD+D F+ +ND  G
Sbjct: 225 MLTQMKHQAWHDPLTGLPNRALCLDRIDRSLHRARRGVDNVCAVAFLDLDRFKVVNDSMG 284

Query: 228 HYLGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFLT----TDREPMKICQTILNKLAQD 283
           +  GD VL+ VA  + +         R+ +DEF  L     ++ E +   Q I   L   
Sbjct: 285 NSAGDQVLREVARRLAENTRTIDTVSRLGSDEFILLLDEVRSEEEALITVQRICTSLEPP 344

Query: 284 YIDQDRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYY 343
                R+++IS S+G+    G   NAD++L NA++A+   K +    +  +   +  Q  
Sbjct: 345 LEVAGRQIRISASVGVVMNRGGG-NADEMLRNANIAMHHVKEHGGDGMAVFQPSMLEQAM 403

Query: 344 RRTQIIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFI 403
              Q    L  +L + +   E ++V QPI+  H R    FE L RWN    G+V P EFI
Sbjct: 404 NLMQ----LEIDLHRALDNNEFFLVYQPIMSLHDRRLTGFEALVRWNHPDRGIVGPSEFI 459

Query: 404 EAAEQSGLIVEFGERILELAC--IAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLLK 461
             +E +G I + G  +L  AC  +A    +Q   + + + +N SA +L+     +E +  
Sbjct: 460 PVSESTGQIHQVGHWVLAEACRALAAWREQQPSMRSVIMHVNLSARQLSQPG-LVEQVAA 518

Query: 462 TIKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSY 521
            ++  G  A    +E+TET+L+        +L  L+E+G ++ +DDFGTGYSSL+Y+  +
Sbjct: 519 VLRETGLPARCLKLEVTETMLMENPDYANLVLRRLKEIGVRLCIDDFGTGYSSLSYLQQF 578

Query: 522 PIDCIKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQ 581
           PID +K+D +FV  +        IV  ++ LA+ L LD+VAEGVE ++    L ++ CE 
Sbjct: 579 PIDTLKVDQSFVARMCREPGHFKIVQAVVALAHSLGLDVVAEGVEEEEQRIMLSELSCEG 638

Query: 582 IQGYYFSRP----DLPSVMIERWR 601
            QGY FSRP    D+P + ++R R
Sbjct: 639 GQGYLFSRPVPGEDVPGLFVDRSR 662