Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 878 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  221 bits (563), Expect = 1e-61
 Identities = 155/476 (32%), Positives = 236/476 (49%), Gaps = 33/476 (6%)

Query: 130 VLISTFTRQLDDFANLVLVHQILAQMIAHDLECKQMEVRSQSLINQLRHEISHDNLTGLM 189
           + IST   +L D    V V   ++         KQ E        QL H    D LT L 
Sbjct: 416 ITISTIYDELGDVRYFVAVFSDISAQ-------KQSEA-------QLAHLAYFDPLTHLP 461

Query: 190 NRNDLAEKLTALVQEDRH------HFTLAFLDIDEFRSINDLHGHYLGDLVLKFVADAIK 243
           NR  L   +  L QE RH           F+D+D F+ IND  GH +GD +L  +A  ++
Sbjct: 462 NRMKL---MMQLKQELRHAKRLNAQLATVFIDVDLFKHINDSFGHSIGDEMLVELAKRLR 518

Query: 244 QAVPEEGYAFRIAADEFAFLTTDREPMKICQTILNKLAQDY-----IDQDRRLKISVSIG 298
             + E+    RI  DEF  L +  +  +     +N+L Q +     +     L+++ S+G
Sbjct: 519 SQLQEQDVLSRIGGDEFVALISGIQSHEDAAAAINQLRQVFEQPFVVSTGDHLRLTASMG 578

Query: 299 ITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQIIEALRSELSK 358
           ++ Y  +  NAD LL NA  A+   K        FY   L+ Q +   +    L+S L  
Sbjct: 579 VSIYPDDGSNADTLLRNADAAMYRAKSEGRNNFAFYTESLTKQSFEHLK----LQSALYG 634

Query: 359 PIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAEQSGLIVEFGER 418
            + Q  LY++ QP +    R     E L RWN   LG ++P  FI  AE+ GLI + G  
Sbjct: 635 ALEQNALYLMYQPKLDLVSRKTIGVEALLRWNDPILGQISPGVFIPVAEKIGLIYDIGLW 694

Query: 419 ILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYGFQADEFTIELT 478
           +LE AC+             R+++N +  +L  S+ ++E + + +   G  A    +E+T
Sbjct: 695 VLETACLQGVRWLTEGKPFGRIAVNVAGQQLQRSS-FVEDVKRILTQTGLPATCLELEVT 753

Query: 479 ETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIKIDAAFVRNLLT 538
           E+V++         L +L +LG ++++DDFGTGYSSLNY+   PI  +KID +FVR++  
Sbjct: 754 ESVMMHNPDVAIRDLKLLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPF 813

Query: 539 NQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYFSRPDLPS 594
           +  + +I   +I L + LKL++VAEGVE Q   + L Q  C+Q QGY FSRP LP+
Sbjct: 814 DTNNTAIAKAVIALGHALKLEIVAEGVETQAQAEFLTQNLCDQAQGYLFSRPLLPA 869