Pairwise Alignments

Query, 430 a.a., peptidase M23 from Vibrio cholerae E7946 ATCC 55056

Subject, 590 a.a., Peptidoglycan-binding LysM from Synechococcus elongatus PCC 7942

 Score = 85.1 bits (209), Expect = 5e-21
 Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 1/90 (1%)

Query: 297 HNGTDFAMPIGTPVYTSGDGVVVMTR-NHPYAGNYVVIQHGNTYMTRYLHLSKILVKKGQ 355
           H G D A P+GTP+  +  GVVV    N    GN V IQH N  +T Y H ++ILV+ G+
Sbjct: 488 HRGIDIAGPVGTPILAAAPGVVVTAGWNSGGYGNLVEIQHPNGSLTLYAHNNRILVRPGE 547

Query: 356 KVSRGQRIGLSGNTGRVTGPHLHYELIVRG 385
           +V +GQ +   G+TGR TGPHLH+E+  RG
Sbjct: 548 RVQQGQIVAEMGSTGRSTGPHLHFEVHPRG 577



 Score = 28.1 bits (61), Expect = 8e-04
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 23/98 (23%)

Query: 26  LLAVAAISSSLNSPTRQQRIE--LSLP-------------ESPLVQFSSAEHTVEVVKVG 70
           LLA+A   S L SP  ++ +E   S+P             E+P++Q  S       ++  
Sbjct: 213 LLALAG-DSRLPSPAAERSVEPISSVPPQATPTLPRPVTAEAPVIQPRSLAPAAVAIRPL 271

Query: 71  HPDYE-------YEIKPGDNLSTIFNQLGFAYTELMKV 101
            P  E       Y ++PGD+LS I  + G    +L++V
Sbjct: 272 SPATELSPEPQAYTVQPGDSLSRIATRFGLDLQDLLQV 309