Pairwise Alignments

Query, 458 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., nucleoside recognition domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  615 bits (1586), Expect = 0.0
 Identities = 298/437 (68%), Positives = 369/437 (84%)

Query: 22  FLIPSLIGLFLFMAPISYDGSLTIPVAVLAKSVQALFGDTLVTVVTAIIAFMSVASVICK 81
           F++PSLIGL LFM PISY+ ++TIP+A+++K++Q++  D L  +VT I+  M++AS++ K
Sbjct: 16  FIVPSLIGLLLFMTPISYNDAITIPIAIISKALQSVLSDVLTLIVTVIVVAMALASLLTK 75

Query: 82  VFKPSWVMSRPFLNSLFNPSWLWLTVRVIGGAAVIMTFFQIGPKAIWEENTGGLVLQGLL 141
           + KP +V++  FLN L N S LWL  RV+G   +++T+F IGP+AI   +TG LVL  LL
Sbjct: 76  LLKPKFVLNNHFLNGLLNISPLWLATRVVGAVFIVLTYFGIGPEAINSSSTGALVLNDLL 135

Query: 142 PTLFSVFIFAGLLLPLLLNFGLLELFGSLLSKVMRPLFNLPGRSAIDCMASWLGDGSVGI 201
           P LFSVFIFAG+LLPLLLNFGLLELFG+LL+KVMRP+FNLPGRSAIDCMASWLGDGSVGI
Sbjct: 136 PVLFSVFIFAGMLLPLLLNFGLLELFGTLLTKVMRPVFNLPGRSAIDCMASWLGDGSVGI 195

Query: 202 LLTSKQYEEKFYTQREAAVVGTTFSAVSITFSLVVIAQVELEHLFLPFYGAVCLAGLVAA 261
           LLTSKQYE +FYTQREAAV+GTTFSAVSITFSLVVI+QV+LE +F+PFY  VCLAG  AA
Sbjct: 196 LLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEQMFVPFYLTVCLAGFAAA 255

Query: 262 VVIPRLPPLSWKKDTYIDGSKPHPDADAIPEGHSAFSWGMELALTKAAKVKSVQSVIGEG 321
           V++P+LPPLSWKKD YID +   PD + IP GH A SWG + AL KAA    V++V+ EG
Sbjct: 256 VIVPKLPPLSWKKDNYIDDTPRQPDDEMIPAGHGALSWGFDKALEKAASAGGVKAVLNEG 315

Query: 322 IRNAVDMVFGVLPVVMGLGTIALVIAEYTSVFSLLGQPFIPFLELLGVPEATAASKTIVV 381
           ++N +DMVFG++PVVM +GT AL+IAE+T +F+ LG PFIP LELL +PEAT ASKTIVV
Sbjct: 316 VKNVIDMVFGIIPVVMAIGTTALIIAEHTPIFNYLGMPFIPLLELLHIPEATEASKTIVV 375

Query: 382 GFADMFIPAILAASIDNEMTRFVIAAMSVTQLIYMSEVGALLLGSRIPVNIVELFVIFIL 441
           GFADMFIP+ILA+SI+++MTRFVIAA+SVTQLIYMSEVGALL+GS+IPVN VELFV+F+L
Sbjct: 376 GFADMFIPSILASSIESDMTRFVIAALSVTQLIYMSEVGALLIGSKIPVNFVELFVVFVL 435

Query: 442 RTLITLPVIAAVAHLLF 458
           RTL+TLPVIA VAHLLF
Sbjct: 436 RTLVTLPVIAGVAHLLF 452