Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., sensory box/GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score = 90.5 bits (223), Expect = 2e-22
 Identities = 64/176 (36%), Positives = 94/176 (53%), Gaps = 23/176 (13%)

Query: 196 VSFILHKEA-----THHRVLALTDPLTGLENRTAMFAEL------ERHRRSGGFSLFLLD 244
           +S + H +A      HH      DPLTGL NRT   + L      ++   S G  LFL D
Sbjct: 793 ISSLKHAQARLDYQAHH------DPLTGLPNRTLFESRLLAALNGQQENGSQGAVLFL-D 845

Query: 245 LNGFKQINDTYGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSIN--STEQ 302
           L+ FK IND+ GH +GD +LK +A RL   +   D  V R+GGDEF I+L  +   S  +
Sbjct: 846 LDRFKHINDSLGHPVGDLLLKGIAVRLREQLRDID-TVARLGGDEFIILLPGLQQPSDAE 904

Query: 303 MMMQRMIKQCFDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
            + Q+++  CF   F+ +G+    ++ S+G S YP D  +++ L+  AD  MY  K
Sbjct: 905 HIAQKLL-NCFAAPFQ-AGEHEFFISASIGTSLYPQDGCDVATLVKNADAAMYRSK 958