Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 7/154 (4%)

Query: 210 LALTDPLTGLENRTAMFAELER--HR---RSGGFSLFLLDLNGFKQINDTYGHQMGDAVL 264
           LAL DPLTGL NR  +   +++  HR   + G F+L  +DL+GFK +ND +GH MGD +L
Sbjct: 261 LALHDPLTGLPNRVLLADRIDQAMHRVQEQGGCFALMFIDLDGFKPVNDAFGHHMGDLLL 320

Query: 265 KQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQMMMQRMIKQCFDHEFELSGDLR 324
           + VA RL   + S D  + R+GGDEF +++      + + +           F ++ +  
Sbjct: 321 RDVALRLREDLRSQD-TLARIGGDEFVLLVQLAEPDDALRLAARQVGLIARTFRVA-EHD 378

Query: 325 AKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
            +++ SVG++ YP +  +  +L+  AD  MY  K
Sbjct: 379 LQISASVGIALYPGNGQSADELLMNADAAMYHAK 412