Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 707 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score = 85.1 bits (209), Expect = 5e-21
 Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 14/166 (8%)

Query: 200 LHKEATHHRVLALTDPLTGLENRTAMFAELER-----HRRSGGFSLFLLDLNGFKQINDT 254
           LH++  +    A+TDPLTGL NR   +   E       R    + L  LDL+GFK++ND+
Sbjct: 268 LHQQLEYQ---AVTDPLTGLLNRRGFYQTAENLLMRSERLESNWVLLYLDLDGFKRVNDS 324

Query: 255 YGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQ--MMMQRMIKQC 312
            GH  GD VL+ V+ +L   +  FD  + R+GGDEF  +L  +   EQ   + +++I++ 
Sbjct: 325 LGHDAGDRVLRWVSEQLKACLRPFDI-LARLGGDEFTALL-DLEFPEQAAKIAEKLIERV 382

Query: 313 FDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
              + ++ G +   L  S+G++TYP    NL  L+  +D  MYE K
Sbjct: 383 AICQ-QIEG-MDVALGASIGIATYPDCGANLDGLLRASDIAMYEAK 426