Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 98.2 bits (243), Expect = 4e-25
 Identities = 69/180 (38%), Positives = 98/180 (54%), Gaps = 11/180 (6%)

Query: 187 LLTFSCVGLVSFILHKE--ATHHRVLALTDPLTGLENRTA----MFAELERHRRSGG-FS 239
           LL F    +V+ I  ++  A  HR +A  D LTGL NR      +   L R RR+GG  +
Sbjct: 259 LLQFVSTQVVTAIERQQLYARLHR-MAQYDELTGLPNRACFRDRLSTALARVRRNGGRIA 317

Query: 240 LFLLDLNGFKQINDTYGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINS 299
           L  +DL+ FKQINDTYGH  GD +L+ VA RL   +   D  V R+GGDEF ++L SI  
Sbjct: 318 LLYVDLDRFKQINDTYGHGGGDQLLRAVADRLTACVRDTD-TVARLGGDEFVVLLESIAE 376

Query: 300 TEQ-MMMQRMIKQCFDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
            E    +   ++  F+    ++G    ++  S+G++ YP D    +QL+  AD  MY MK
Sbjct: 377 PEDAQRVVEKVRSAFEQPLSITGH-SLEIGMSIGIALYPEDGETETQLLKQADDRMYLMK 435