Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 889 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score = 88.6 bits (218), Expect = 6e-22
 Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 12/177 (6%)

Query: 192 CVGLVSFILHKEATHHRVLALT-----DPLTGLENRTAMFAE-----LERHRRSGGFSLF 241
           CVG +SF +          AL      D LTGL NR  +  +     L   R     ++ 
Sbjct: 442 CVGFISFGIDITDRRDNEKALERQACYDFLTGLANRFLLQEQGQELLLLAKRSQEMLAVI 501

Query: 242 LLDLNGFKQINDTYGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTE 301
            +DL+ FK IND +GH++GD VL +VA R+  S+   D  + R+ GDEF +IL + ++  
Sbjct: 502 FIDLDRFKDINDNFGHEVGDRVLVEVAQRIRQSVRQSDL-IARLSGDEFVVILPNTDAQG 560

Query: 302 QMMMQRMIKQCFDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
              + + ++Q       + GD   +L TS+G+S +P+D  +L  LI  AD  MY +K
Sbjct: 561 AATLAQKLQQQITPPIAI-GDRSIQLTTSLGISLFPVDGDDLEILIKKADTAMYSIK 616