Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 820 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 11/169 (6%)

Query: 195 LVSFILHKEATHHRV--LALTDPLTGLENRTAMFAELERH-RRSG-----GFSLFLLDLN 246
           L++ +  ++A   R+  LA  DPLTGL NR + F +LE+   R+G     G ++  +DL+
Sbjct: 358 LIADVTDRKAMIDRLTFLAQRDPLTGLINRRSFFDDLEKAVARAGRFPAAGVAVISIDLD 417

Query: 247 GFKQINDTYGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQMMMQ 306
            FK +ND+ GHQ GD +LK+VA  L   +   D  + R+GGDEFA++L  +N    + + 
Sbjct: 418 RFKYVNDSLGHQAGDCLLKEVAEVLFGRLRETDL-LARLGGDEFAVLLHGVNREGALHVA 476

Query: 307 RMIKQCF-DHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNM 354
             ++ C  D+ F   G    ++  S+GV+T+  D  +   L+  AD  M
Sbjct: 477 EALRLCLADYAFSYDGK-SVEIGCSLGVATWAADVDDPEDLLARADMAM 524