Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  101 bits (251), Expect = 1e-25
 Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 14/207 (6%)

Query: 164 QSPLYVEQKEKLNYLSRIQFALIL----LTFSCVGLVSFILHKEATHHRVL--ALTDPLT 217
           Q  L+++ K    Y+  +    I       +  V L S I  K+   H +   A  DPLT
Sbjct: 528 QGELWIKNKSGEEYMVWLTINTIFDQHGQVYRRVALFSDITEKKEAEHIIWKQANYDPLT 587

Query: 218 GLENRTAMFAELERH-----RRSGGFSLFLLDLNGFKQINDTYGHQMGDAVLKQVAYRLN 272
           GL NR  +   L        R    F+L  LDL+ FK++NDT GH MGD +L++ A RL 
Sbjct: 588 GLPNRRMLLEYLNTEILRIDRNHSHFALMFLDLDFFKEVNDTLGHDMGDLLLQETAKRLK 647

Query: 273 NSIPSFDYRVFRMGGDEFAIILSSINSTEQM-MMQRMIKQCFDHEFELSGDLRAKLNTSV 331
             I   D  V R+GGDEF ++LS I+S   +  + + I +     + L GD  A ++ S+
Sbjct: 648 GCIRESDV-VARLGGDEFTVVLSGIDSPSGVERVAQSILERIAEPYSL-GDETAYISASI 705

Query: 332 GVSTYPLDSTNLSQLIHLADKNMYEMK 358
           G++ YP D+T++  L+  AD+ MY  K
Sbjct: 706 GITIYPDDATSIEGLLKHADQAMYAAK 732