Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 57/169 (33%), Positives = 81/169 (47%), Gaps = 25/169 (14%)

Query: 214 DPLTGLENRT----AMFAELERHRRS--------------GGFSLFLLDLNGFKQINDTY 255
           DPLTGL+NR      +  +L R  RS                    ++D++ FK INDTY
Sbjct: 181 DPLTGLKNRRFIEEMIAQDLNRVDRSYDATQLRGEGTPSKADLLALIIDIDHFKPINDTY 240

Query: 256 GHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQMMMQRMIKQCFDH 315
           GH  GD VL QV  RL     ++DY V R GG+EF ++   I+  E   +   ++   + 
Sbjct: 241 GHLAGDRVLSQVGQRLTTLFRNYDY-VVRWGGEEFLVVARFIDRQEINHLAEKVRHAIES 299

Query: 316 -EFELSGDLRAKLNTSVGVSTYPL-----DSTNLSQLIHLADKNMYEMK 358
            E EL      K+  SVG + YP      D  +  Q++HLAD  +Y+ K
Sbjct: 300 MEIELDAKRNIKITASVGAAPYPFSTAQADRISWEQVVHLADMALYQAK 348