Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 10/166 (6%)

Query: 200 LHKEATHHRVLALTDPLTGLENRTAMFAELER-----HRRSGGFSLFLLDLNGFKQINDT 254
           L ++    + +A  D LTGL +R+A   +++       R     ++  +DL+ FKQ+ND+
Sbjct: 257 LKRQTQKLKYVAEHDDLTGLYSRSAFERQIDTAIARCQRTQMHAAMLFIDLDKFKQVNDS 316

Query: 255 YGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQ--MMMQRMIKQC 312
            GH  GD VL   A R+ +++ S D    R+GGDEF + L  IN  E+  +++ ++I+Q 
Sbjct: 317 LGHDNGDKVLSTAARRMQSAVRSSDI-CGRLGGDEFVVWLEPINDIEEVTIVIDKIIRQI 375

Query: 313 FDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
                 + G     L  S+GV+ YP D      LI +AD NMY+ K
Sbjct: 376 SPP--IVCGRTTVSLTVSIGVAMYPRDELTRLSLIKVADDNMYQAK 419